RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 NET1Q7Z628 596 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 ANKRD46Q86W74 232 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 TICAM1Q8IUC6 712 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PLXDC1Q8IUK5 500 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CLECL1Q8IZS7 167 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SHISA5Q8N114 240 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CARFQ8N187 725 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CSNK1A1LQ8N752 337 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 RNF148Q8N7C7 305 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 Q8N9G6 341 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 FAM47BQ8NA70 645 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SUMF1Q8NBK3 374 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 FAM156AQ8NDB6 213 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 OR6C4Q8NGE1 309 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 DNAJB8Q8NHS0 232 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 GOT1L1Q8NHS2 421 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CDC26Q8NHZ8 85 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 KLHL6Q8WZ60 621 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 TCEAL3Q969E4 200 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 RERGQ96A58 199 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CIDECQ96AQ7 238 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PPCDCQ96CD2 204 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 ZDHHC12Q96GR4 267 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 AHCYL2Q96HN2 611 aaKnown RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 ITCHQ96J02 903 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CCDC115Q96NT0 180 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PHF12Q96QT6 1004 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SERINC2Q96SA4 455 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PRPF18Q99633 342 aaKnown RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 MAPKAP1Q9BPZ7 522 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CPPED1Q9BRF8 314 aaPredicted RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 NUDT22Q9BRQ3 303 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CENPKQ9BS16 269 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 GTPBP2Q9BX10 602 aaKnown RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 IKZF5Q9H5V7 419 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 RMND5AQ9H871 391 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PRM3Q9NNZ6 103 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SPAG4Q9NPE6 437 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 STARD5Q9NSY2 213 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 DNAAF2Q9NVR5 837 aaKnown RBP5.69□□□□□ -1.5
SDC4P-201ENST00000453285 TAS2R7Q9NYW3 318 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 ADA2Q9NZK5 511 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SH3BP4Q9P0V3 963 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PDP2Q9P2J9 529 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 GMEB2Q9UKD1 530 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 CES1P1Q9UKY3 287 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PLCL2Q9UPR0 1127 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 ATG4BQ9Y4P1 393 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 PCDHGB2Q9Y5G2 931 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 GMEB1Q9Y692 573 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 SLC22A7Q9Y694 548 aa5.69□□□□□ -1.5
SDC4P-201ENST00000453285 C15orf38-AP3S2A0A0A6YYH1 394 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 LNP1A1A4G5 178 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 C1orf226A1L170 272 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CPED1A4D0V7 1026 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 FITM1A5D6W6 292 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 URADA6NGE7 173 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 RFXANKO14593 260 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CDX4O14627 284 aaPredicted RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 PGRMC2O15173 223 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 FOXS1O43638 330 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 GALR3O60755 368 aaPredicted RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ENTPD5O75356 428 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 PRKRAO75569 313 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ZBTB11O95625 1053 aaPredicted RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CPSF4O95639 269 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 AIFM1O95831 613 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 C6orf47O95873 294 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 EIF2S1P05198 315 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 GSNP06396 782 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CKMT1AP12532 417 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ALOX12P18054 663 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 IL1RNP18510 177 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 GCGRP47871 477 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 GSK3BP49841 420 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 LIM2P55344 173 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 EEFSECP57772 596 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 MTPNP58546 118 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ACTR3P61158 418 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 HBA1P69905 142 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 TGM3Q08188 693 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 TRAP1Q12931 704 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CCNIQ14094 377 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 TRIM25Q14258 630 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 HEPACAMQ14CZ8 416 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 SUZ12Q15022 739 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 CEBPEQ15744 281 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 FXNQ16595 210 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 INAVAQ3KP66 663 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 SPATS1Q496A3 300 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 DEFB134Q4QY38 66 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 SAMD4BQ5PRF9 694 aaKnown RBP5.68□□□□□ -1.5
SDC4P-201ENST00000453285 C6orf10Q5SRN2 563 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 NDUFAF5Q5TEU4 345 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 ANXA8L1Q5VT79 327 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 FBXW10Q5XX13 1052 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 C18orf63Q68DL7 685 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 LAIR1Q6GTX8 287 aa5.68□□□□□ -1.5
SDC4P-201ENST00000453285 TMEM71Q6P5X7 295 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms