RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TEFMQ96QE5 360 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 DOHHQ9BU89 302 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 SCN3AQ9NY46 2000 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 BCKDKO14874 412 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 HAT1O14929 419 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 ERAL1O75616 437 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 ASGR2P07307 311 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 SLC5A2P31639 672 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 DNAJA1P31689 397 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 BCL6P41182 706 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 ACTR1BP42025 376 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 ACTR1AP61163 376 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 TEAD4Q15561 434 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 GPR107Q5VW38 600 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CEACAM20Q6UY09 585 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 DGLUCYQ7Z3D6 616 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 UBE3DQ7Z6J8 389 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 OR8K5Q8NH50 307 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 LCN9Q8WX39 176 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 OR2M4Q96R27 311 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 KLHL25Q9H0H3 589 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 TMEM168Q9H0V1 697 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 SIRT5Q9NXA8 310 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 FBXW2Q9UKT8 454 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 TCRBV21S2A2A0A5A6 115 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 NDUFV2P19404 249 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 HNRNPFP52597 415 aaKnown RBP11.21□□□□□ -0.61
VTA1-203ENST00000452973 PRKAG1P54619 331 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 SELENOWP63302 87 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 CTBSQ01459 385 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 DMPKQ09013 629 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 GOT1L1Q8NHS2 421 aaPredicted RBP11.21□□□□□ -0.61
VTA1-203ENST00000452973 TAMM41Q96BW9 452 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 DCUN1D5Q9BTE7 237 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 KRT84Q9NSB2 600 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 USE1Q9NZ43 259 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 EBF1Q9UH73 591 aa11.21□□□□□ -0.61
VTA1-203ENST00000452973 SDK1Q7Z5N4 2213 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 J3KTA2 159 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 XPNPEP2O43895 674 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 C8orf89P0DMQ9 161 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 PKLRP30613 574 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 GPC1P35052 558 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 OR4C11Q6IEV9 310 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 PIK3C3Q8NEB9 887 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 PJA1Q8NG27 643 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 MTERF3Q96E29 417 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 C7orf34Q96L11 122 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 SLC6A20Q9NP91 592 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 RASSF1Q9NS23 344 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 RHCGQ9UBD6 479 aa11.21□□□□□ -0.62
VTA1-203ENST00000452973 NDRG2Q9UN36 371 aaKnown RBP11.21□□□□□ -0.62
VTA1-203ENST00000452973 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 KRT75O95678 551 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 BCHEP06276 602 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 FPR1P21462 350 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CDK9P50750 372 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 EPS8Q12929 822 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 GANABQ14697 944 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 RAB39AQ14964 217 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 ZNF750Q32MQ0 723 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 ZNF542PQ5EBM4 170 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 C6orf141Q5SZD1 244 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 NDUFAF5Q5TEU4 345 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 IKBIPQ70UQ0 350 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 HMGN2P46Q86SG4 172 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CHDHQ8NE62 594 aaPredicted RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 OR2L3Q8NG85 312 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 OR2L8Q8NGY9 312 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 NCSTNQ92542 709 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 UBE2FQ969M7 185 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 ZNF576Q9H609 170 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 FANCEQ9HB96 536 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CD207Q9UJ71 328 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CCDC85CA6NKD9 419 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 C5orf58C9J3I9 102 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 MAN1A2O60476 641 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 SEMA3DO95025 777 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 POU2F1P14859 743 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 FMO3P31513 532 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 SLC19A1P41440 591 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TPMTP51580 245 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CDH12P55289 794 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 DSTNP60981 165 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 SPIBQ01892 262 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 ROR2Q01974 943 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 KIAA1614Q5VZ46 1190 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 ZNF793Q6ZN11 406 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 OLIG3Q7RTU3 272 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 HORMAD2Q8N7B1 307 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TTC29Q8NA56 475 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms