RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZNF793Q6ZN11 406 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 GPRIN3Q6ZVF9 776 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 ASB18Q6ZVZ8 466 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 CCNYL1Q8N7R7 359 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 ACOT4Q8N9L9 421 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 ELOVL6Q9H5J4 265 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 MLXIPLQ9NP71 852 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 C19orf25Q9UFG5 118 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-202ENST00000452372 DAPP1Q9UN19 280 aa18.77■□□□□ 0.6
COL9A3-202ENST00000452372 UTP20O75691 2785 aaKnown RBP18.77■□□□□ 0.6
COL9A3-202ENST00000452372 FAM227AF5H4B4 570 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 MASP2O00187 686 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 SAP18O00422 153 aaKnown RBP18.76■□□□□ 0.59
COL9A3-202ENST00000452372 RTCAO00442 366 aaKnown RBP18.76■□□□□ 0.59
COL9A3-202ENST00000452372 CDC123O75794 336 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-202ENST00000452372 ETHE1O95571 254 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 HPP00738 406 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 COX6A1P12074 109 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 HIST1H1TP22492 207 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-202ENST00000452372 LIM2P55344 173 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 PKNOX1P55347 436 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 RAB38P57729 211 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 TNFAIP8L3Q5GJ75 292 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 QSOX2Q6ZRP7 698 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 GALNT16Q8N428 558 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 FDCSPQ8NFU4 85 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 TCP10LQ8TDR4 215 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 ADAMTS18Q8TE60 1221 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 MIB2Q96AX9 1013 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 FAM111AQ96PZ2 611 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 SERPINI1Q99574 410 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 SLC25A23Q9BV35 468 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF700Q9H0M5 742 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 KCMF1Q9P0J7 381 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 SNX6Q9UNH7 406 aa18.76■□□□□ 0.59
COL9A3-202ENST00000452372 SPTAN1Q13813 2472 aaKnown RBP18.76■□□□□ 0.59
COL9A3-202ENST00000452372 IGHV1-45A0A0A0MS14 117 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 NSG1A0A0A6YYJ2 146 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 A6NL46 340 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PLPP1O14494 284 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 TYROBPO43914 113 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PRMT3O60678 531 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 SSR2P43308 183 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 RAP1GDS1P52306 607 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 EEF1A2Q05639 463 aaKnown RBP18.75■□□□□ 0.59
COL9A3-202ENST00000452372 RCN2Q14257 317 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PCLAFQ15004 111 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 ABRAXAS2Q15018 415 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PCOLCEQ15113 449 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 NSDHLQ15738 373 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 LIPMQ5VYY2 423 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 LANCL3Q6ZV70 420 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 ANKRD37Q7Z713 158 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 C10orf107Q8IVU9 208 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 CDYL2Q8N8U2 506 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 METTL6Q8TCB7 284 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PGM2Q96G03 612 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 PTCHD1Q96NR3 888 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF160Q9HCG1 818 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 LYRM4Q9HD34 91 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 SLC17A7Q9P2U7 560 aa18.75■□□□□ 0.59
COL9A3-202ENST00000452372 G3BP2Q9UN86 482 aaKnown RBP18.75■□□□□ 0.59
COL9A3-202ENST00000452372 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 KLHL41O60662 606 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 TRIM13O60858 407 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SEMA3DO95025 777 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 ESRRBO95718 433 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 PDYNP01213 254 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 BSGP35613 385 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 CD97P48960 835 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 MLLT10P55197 1068 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 BTG2P78543 158 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 UBAP2LQ14157 1087 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 MYBPC3Q14896 1274 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SGO1Q5FBB7 561 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 CFAP157Q5JU67 520 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 FRMD7Q6ZUT3 714 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 CPEB2Q7Z5Q1 589 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 EXOC3L1Q86VI1 746 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 PARP9Q8IXQ6 854 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 ZCCHC7Q8N3Z6 543 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 TEX19Q8NA77 164 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 AGAP11Q8TF27 550 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SELENOMQ8WWX9 145 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 TSLPQ969D9 159 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 IMMP1LQ96LU5 166 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SORBS1Q9BX66 1292 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF717Q9BY31 904 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SLC29A3Q9BZD2 475 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 CENPHQ9H3R5 247 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 BRF2Q9HAW0 419 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SSU72Q9NP77 194 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 PRDM9Q9NQV7 894 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 FARSBQ9NSD9 589 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 RIC8BQ9NVN3 520 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 GPR83Q9NYM4 423 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 MRPS33Q9Y291 106 aaKnown RBP18.74■□□□□ 0.59
COL9A3-202ENST00000452372 MMACHCQ9Y4U1 282 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 PCDHGB7Q9Y5F8 929 aa18.74■□□□□ 0.59
COL9A3-202ENST00000452372 SHANK1Q9Y566 2161 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms