RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ASIC5Q9NY37 505 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 KCMF1Q9P0J7 381 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ZNF282Q9UDV7 671 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-204ENST00000452182 PHF11Q9UIL8 331 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ADAM21Q9UKJ8 722 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ASB4Q9Y574 426 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 MAU2Q9Y6X3 613 aa10.95□□□□□ -0.66
SCN9A-204ENST00000452182 ASPMQ8IZT6 3477 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 BLACEA4D250 179 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 ZNF860A6NHJ4 632 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 VSTM2BA6NLU5 285 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 CHST10O43529 356 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 TMPRSS11DO60235 418 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 PCDH7O60245 1069 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 SHOX2O60902 331 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 GUCY1B2O75343 617 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 RAB40ALP0C0E4 278 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 FAM58BPP0C7Q3 252 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 LBPP18428 481 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 MAPK1P28482 360 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 EPHA3P29320 983 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 IDH3AP50213 366 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 MAPK12P53778 367 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 AQP5P55064 265 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 LIM2P55344 173 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 RAB38P57729 211 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 ERVK-8P63133 956 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 MAT1AQ00266 395 aaKnown RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 SLAMF1Q13291 335 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 SLC9B1Q4ZJI4 515 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 LCN10Q6JVE6 187 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 CGB2Q6NT52 195 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 FAM198BQ6UWH4 519 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 GPR180Q86V85 440 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 FNDC5Q8NAU1 212 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 OR5T3Q8NGG3 340 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 OR51Q1Q8NH59 317 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 GATA6Q92908 595 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 FGF11Q92914 225 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 NKD1Q969G9 470 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 PPP1R36Q96LQ0 422 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 CCDC28BQ9BUN5 200 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 WDR55Q9H6Y2 383 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 KCNK13Q9HB14 408 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 PRDM9Q9NQV7 894 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 IFT80Q9P2H3 777 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 TRPC4Q9UBN4 977 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 NXT1Q9UKK6 140 aaKnown RBP10.94□□□□□ -0.66
SCN9A-204ENST00000452182 SPACA6W5XKT8 324 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 FREM2Q5SZK8 3169 aa10.94□□□□□ -0.66
SCN9A-204ENST00000452182 NUP210LQ5VU65 1888 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 C21orf140B9A014 251 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 C9J4A7 227 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 TERTO14746 1132 aaKnown RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 PROM1O43490 865 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 DIAPH2O60879 1101 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 DNAJB6O75190 326 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 CYC1P08574 325 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 ANXA4P09525 319 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 RNH1P13489 461 aaKnown RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 XCR1P46094 333 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 SEC24CP53992 1094 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 OLR1P78380 273 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 OCA2Q04671 838 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 ZNF763Q0D2J5 394 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 NCF4Q15080 339 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 ACAD11Q709F0 780 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 SPATA19Q7Z5L4 167 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 CACNA2D3Q8IZS8 1091 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 SNIP1Q8TAD8 396 aaKnown RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 TBC1D20Q96BZ9 403 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 RNF31Q96EP0 1072 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 MAPKAP1Q9BPZ7 522 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 GPR87Q9BY21 358 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 TCF7L2Q9NQB0 619 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 NOP53Q9NZM5 478 aaKnown RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 HCN3Q9P1Z3 774 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 KLHL14Q9P2G3 628 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 GPN3Q9UHW5 284 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 DLGAP4Q9Y2H0 992 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 POLR3HQ9Y535 204 aaPredicted RBP10.93□□□□□ -0.66
SCN9A-204ENST00000452182 PCDHGA6Q9Y5G7 932 aa10.93□□□□□ -0.66
SCN9A-204ENST00000452182 GNG14A0A1W2PPG7 69 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 MED19A0JLT2 244 aaPredicted RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 CYR61O00622 381 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 BMP10O95393 424 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 GBAP04062 536 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 CAPNS1P04632 268 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 FHP07954 510 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 ZGLP1P0C6A0 271 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 PRPS2P11908 318 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 SDC1P18827 310 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms