RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 FAM227AF5H4B4 570 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 RGS14O43566 566 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 CDC123O75794 336 aaPredicted RBP22.7■■□□□ 1.22
CPSF4-207ENST00000451876 PRPH2P23942 346 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 HNRNPH2P55795 449 aaKnown RBP22.7■■□□□ 1.22
CPSF4-207ENST00000451876 KLC1Q07866 573 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 ACSM2AQ08AH3 577 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 NR6A1Q15406 480 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 ACSM2BQ68CK6 577 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 NUF2Q9BZD4 464 aa22.7■■□□□ 1.22
CPSF4-207ENST00000451876 CLK4Q9HAZ1 481 aaKnown RBP22.7■■□□□ 1.22
CPSF4-207ENST00000451876 MAP1BP46821 2468 aaKnown RBP22.7■■□□□ 1.22
CPSF4-207ENST00000451876 NPIPB8E9PQR5 432 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 LSM1O15116 133 aaKnown RBP22.69■■□□□ 1.22
CPSF4-207ENST00000451876 RRP8O43159 456 aaKnown RBP22.69■■□□□ 1.22
CPSF4-207ENST00000451876 EFSO43281 561 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 KIAA0040Q15053 153 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 SPIN4Q56A73 249 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 MRM1Q6IN84 353 aaKnown RBP22.69■■□□□ 1.22
CPSF4-207ENST00000451876 HOMEZQ8IX15 550 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 KIRREL3Q8IZU9 778 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 FAM47BQ8NA70 645 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 OR2Y1Q8NGV0 311 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 PIWIL2Q8TC59 973 aaKnown RBP22.69■■□□□ 1.22
CPSF4-207ENST00000451876 STARD8Q92502 1023 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 TBC1D20Q96BZ9 403 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 CCNL2Q96S94 520 aaPredicted RBP22.69■■□□□ 1.22
CPSF4-207ENST00000451876 LANCL2Q9NS86 450 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 ADAM29Q9UKF5 820 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 FBXW2Q9UKT8 454 aa22.69■■□□□ 1.22
CPSF4-207ENST00000451876 UMODP07911 640 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 RNH1P13489 461 aaKnown RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 ITPKBP27987 946 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 RAB38P57729 211 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 CCNYL2Q5T2Q4 361 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 CYP20A1Q6UW02 462 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 RIPOR1Q6ZS17 1223 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 PAGE2Q7Z2X7 111 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 CRLF3Q8IUI8 442 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 EFCAB3Q8N7B9 438 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 TMEM52Q8NDY8 209 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 OR1F2PQ96R84 312 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 EBPLQ9BY08 206 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 LRTM1Q9HBL6 345 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 LYRM4Q9HD34 91 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 C14orf105Q9NVL8 296 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 NXT1Q9UKK6 140 aaKnown RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 PADI2Q9Y2J8 665 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 ATG4BQ9Y4P1 393 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 ASB4Q9Y574 426 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 PCSK5Q92824 1860 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 TCP11X1B4DZS4 312 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 PCDH7O60245 1069 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 FHP07954 510 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 FAM58BPP0C7Q3 252 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 MDH1P40925 334 aaKnown RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 HNRNPFP52597 415 aaKnown RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 HK2P52789 917 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 TLE3Q04726 772 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 IL10RAQ13651 578 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 GALNTL6Q49A17 601 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 RFTN2Q52LD8 501 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 GALNT18Q6P9A2 607 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 MAVSQ7Z434 540 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 WDR75Q8IWA0 830 aaKnown RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 CCT7Q99832 543 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 C1orf109Q9NX04 203 aa22.68■■□□□ 1.22
CPSF4-207ENST00000451876 TEX10Q9NXF1 929 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 POLR3HQ9Y535 204 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-207ENST00000451876 CYR61O00622 381 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 HDAC3O15379 428 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 SEC22BO75396 215 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 PRKRAO75569 313 aaKnown RBP22.67■■□□□ 1.22
CPSF4-207ENST00000451876 TIA1P31483 386 aaKnown RBP eCLIP22.67■■□□□ 1.22
CPSF4-207ENST00000451876 FOLR3P41439 243 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 RPL38P63173 70 aaKnown RBP22.67■■□□□ 1.22
CPSF4-207ENST00000451876 MINDY4Q4G0A6 757 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 MFSD4BQ5TF39 518 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 VWA5B1Q5TIE3 1220 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 GPR180Q86V85 440 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 SLC45A3Q96JT2 553 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 MESP1Q9BRJ9 268 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 FAM117AQ9C073 453 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 MCM8Q9UJA3 840 aa22.67■■□□□ 1.22
CPSF4-207ENST00000451876 A0A087WV48 116 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 ARHGAP10A1A4S6 786 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 IDSB3KWA1 339 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 PSMD12O00232 456 aaPredicted RBP22.66■■□□□ 1.22
CPSF4-207ENST00000451876 B4GALT2O60909 372 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 PEX11AO75192 247 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 CREG1O75629 220 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 CD63P08962 238 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 MAPK12P53778 367 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 GYS2P54840 703 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 C18orf63Q68DL7 685 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 TUBGCP3Q96CW5 907 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 CNTNAP3BQ96NU0 1288 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 CRB3Q9BUF7 120 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 EFHD1Q9BUP0 239 aa22.66■■□□□ 1.22
CPSF4-207ENST00000451876 CNTNAP3Q9BZ76 1288 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms