RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CD96P40200 585 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ALDH18A1P54886 795 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 STX4Q12846 297 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 GTF2H2Q13888 395 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 INAQ16352 499 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 CPSF6Q16630 551 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP54-207ENST00000451492 ADPRMQ3LIE5 342 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 TEX35Q5T0J7 233 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 RPUSD3Q6P087 351 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 GTF2H2CQ6P1K8 395 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 GFRALQ6UXV0 394 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 GALNTL5Q7Z4T8 443 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 FJX1Q86VR8 437 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 RPS19BP1Q86WX3 136 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 SCUBE1Q8IWY4 988 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 CEP112Q8N8E3 955 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 PTGR2Q8N8N7 351 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 OR7G3Q8NG95 312 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 HUS1BQ8NHY5 278 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 RHEBL1Q8TAI7 183 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ELP5Q8TE02 316 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ZNF473Q8WTR7 871 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 DCAKDQ8WVC6 231 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 NR4A3Q92570 626 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 UBE2E3Q969T4 207 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 ATP6V1E2Q96A05 226 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 MTFMTQ96DP5 389 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 WDR34Q96EX3 536 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 KCNC2Q96PR1 638 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 PSMG3-AS1Q96PY0 264 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 CDK15Q96Q40 435 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 BARD1Q99728 777 aaKnown RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 SLX1AQ9BQ83 275 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 NPLQ9BXD5 320 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 PITHD1Q9GZP4 211 aaPredicted RBP9.05□□□□□ -0.96
USP54-207ENST00000451492 RNF32Q9H0A6 362 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 IPPKQ9H8X2 491 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 COPG2Q9UBF2 871 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 DAPP1Q9UN19 280 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 SLC5A6Q9Y289 635 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 MMACHCQ9Y4U1 282 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 CNTRLQ7Z7A1 2325 aa9.05□□□□□ -0.96
USP54-207ENST00000451492 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 USP9XQ93008 2570 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 TRGV8A0A0C4DH27 118 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CLDN4O14493 209 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 PLPP1O14494 284 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 FCHO1O14526 889 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ZNHIT1O43257 154 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 PRKNO60260 465 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 KRT38O76015 456 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 LDLRP01130 860 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CD46P15529 392 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ATP5A1P25705 553 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 COL8A1P27658 744 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 RFC3P40938 356 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 SERPINB9P50453 376 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CLCN2P51788 898 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 TDGF1P3P51864 188 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CCNG1P51959 295 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 HSD17B7P56937 341 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 RPS13P62277 151 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 PHEXP78562 749 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 NAA30Q147X3 362 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 TBCCQ15814 346 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 MAPKAPK3Q16644 382 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 AP5B1Q2VPB7 878 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 GLE1Q53GS7 698 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 C16orf47Q6ZP98 133 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 UBE3DQ7Z6J8 389 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 OR4N5Q8IXE1 308 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ZNF595Q8IYB9 648 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 LAS2Q8IYD9 372 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ACOT4Q8N9L9 421 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 APCDD1LQ8NCL9 501 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 LRRN4CLQ8ND94 238 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 NFAM1Q8NET5 270 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 B3GNT7Q8NFL0 401 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ADAMTS18Q8TE60 1221 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 DOK4Q8TEW6 326 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CMTM7Q96FZ5 175 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 SEC16BQ96JE7 1060 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 NSUN5Q96P11 429 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 GPR78Q96P69 363 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 TSPYL1Q9H0U9 437 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 NOL11Q9H8H0 719 aaKnown RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 ADAP2Q9NPF8 381 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 DMRT3Q9NQL9 472 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 PRDM7Q9NQW5 492 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 ZNF223Q9UK11 482 aaPredicted RBP9.04□□□□□ -0.96
USP54-207ENST00000451492 RNF11Q9Y3C5 154 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 SPACA6W5XKT8 324 aa9.04□□□□□ -0.96
USP54-207ENST00000451492 CYR61O00622 381 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms