RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PCDHB11Q9Y5F2 797 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 SLC16A6O15403 523 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 KEAP1Q14145 624 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 HYAL4Q2M3T9 481 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 TMEM220Q6QAJ8 160 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 AGTRAPQ6RW13 159 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 HSDL2Q6YN16 418 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF551Q7Z340 670 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 CNDP2Q96KP4 475 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MND1Q9BWT6 205 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 SORBS1Q9BX66 1292 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 SLC29A3Q9BZD2 475 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MKRN2Q9H000 416 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 UNCXA6NJT0 531 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 CLDN24A6NM45 220 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.51
UBE3B-204ENST00000449510 DSTNP60981 165 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 ST8SIA6P61647 398 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 FAAH2Q6GMR7 532 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 CMTM7Q96FZ5 175 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 NMNAT1Q9HAN9 279 aaPredicted RBP11.9□□□□□ -0.51
UBE3B-204ENST00000449510 FBXO8Q9NRD0 319 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 AHSPQ9NZD4 102 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF282Q9UDV7 671 aaPredicted RBP11.9□□□□□ -0.51
UBE3B-204ENST00000449510 ABT1Q9ULW3 272 aaKnown RBP11.9□□□□□ -0.51
UBE3B-204ENST00000449510 PCDHGA6Q9Y5G7 932 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.51
UBE3B-204ENST00000449510 C2orf78A6NCI8 922 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 MMP2P08253 660 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 PRKCAP17252 672 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 OR3A3P47888 321 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 RD3Q7Z3Z2 195 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 NATD1Q8N6N6 113 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 TRPV1Q8NER1 839 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 CPPED1Q9BRF8 314 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 GINS4Q9BRT9 223 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SAP130Q9H0E3 1048 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ACTL8Q9H568 366 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 CLMPQ9H6B4 373 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 PSORS1C1Q9UIG5 152 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SCML2Q9UQR0 700 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 RP1P56715 2156 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 E7EQ34 232 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 CNMDO75829 334 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ASGR1P07306 291 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SAGP10523 405 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 CYP2A6P11509 494 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 HOXD8P13378 290 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 HLA-EP13747 358 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 NRIP1P48552 1158 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 HOXC5Q00444 222 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 RAET1GQ6H3X3 334 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF367Q7RTV3 350 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 PDZD3Q86UT5 571 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SMG9Q9H0W8 520 aaKnown RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 MAGIXQ9H6Y5 334 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SLC25A13Q9UJS0 675 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 RREB1Q92766 1687 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 GABRR3A8MPY1 467 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 LRRTM2O43300 516 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 KCNK5O95279 499 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 BMP7P18075 431 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SSR2P43308 183 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 POU6F2P78424 691 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 RGNQ15493 299 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF792Q3KQV3 632 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ADGRF1Q5T601 910 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ADNP2Q6IQ32 1131 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 SLC43A3Q8NBI5 491 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 NLGN4YQ8NFZ3 816 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-204ENST00000449510 BBS10Q8TAM1 723 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 TTLL2Q9BWV7 592 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 GPR62Q9BZJ7 368 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 ANKHQ9HCJ1 492 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 CFAP97Q9P2B7 532 aa11.89□□□□□ -0.51
UBE3B-204ENST00000449510 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 A0A1W2PRG6 482 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 HMX3A6NHT5 357 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 FAM25EA8MYX2 175 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 M0R3H8 397 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 LYRM1O43325 122 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GPX5O75715 221 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ENDOUP21128 410 aaKnown RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SLC6A4P31645 630 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GRK5P34947 590 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ACVR1BP36896 505 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms