RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SRPK3Q9UPE1 567 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 ATG4BQ9Y4P1 393 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 ASB4Q9Y574 426 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 A0A1B0GX78 115 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FAM234BA2RU67 622 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FAM149AA5PLN7 773 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 DSCR3O14972 297 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 AIFM1O95831 613 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 NTRK1P04629 796 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FGF5P12034 268 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 ETV5P41161 510 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 GCGRP47871 477 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 OR1D4P47884 311 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 TRA2BP62995 288 aaKnown RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 SHC2P98077 582 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 MAT1AQ00266 395 aaKnown RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 IL11RAQ14626 422 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 SYT16Q17RD7 645 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 RSPO4Q2I0M5 234 aaPredicted RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 PGS1Q32NB8 556 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FAM174BQ3ZCQ3 159 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 C3orf38Q5JPI3 329 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 SPANXN4Q5MJ08 99 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 NDUFAF5Q5TEU4 345 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 YOD1Q5VVQ6 348 aaPredicted RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 MRM1Q6IN84 353 aaKnown RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 NIPAL1Q6NVV3 410 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 GPR180Q86V85 440 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 SHISA5Q8N114 240 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 CA13Q8N1Q1 262 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 OR7A2PQ8NGA2 310 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNF-208ENST00000449264 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.84□□□□□ -0.19
TNF-208ENST00000449264 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 CSF3RQ99062 836 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 FAIM2Q9BWQ8 316 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 RBCK1Q9BYM8 510 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 CLMPQ9H6B4 373 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 ENAMQ9NRM1 1142 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 PHF11Q9UIL8 331 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 DAPP1Q9UN19 280 aa13.84□□□□□ -0.19
TNF-208ENST00000449264 CCDC187A0A096LP49 1063 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 A0A1W2PR48 441 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 GLOD5A6NK44 160 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 B4E171 279 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 PRMT3O60678 531 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 GUCY1B2O75343 617 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 KCNK5O95279 499 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 NR2F6P10588 404 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 COX4I1P13073 169 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 CAPN3P20807 821 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 CPN2P22792 545 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 BUD31P41223 144 aaPredicted RBP13.83□□□□□ -0.2
TNF-208ENST00000449264 TSPAN7P41732 249 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 GSTM5P46439 218 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 ZFP36L2P47974 494 aaKnown RBP13.83□□□□□ -0.2
TNF-208ENST00000449264 CPA2P48052 419 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 DGKQP52824 942 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 TNFRSF17Q02223 184 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 RCAN2Q14206 197 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 HEPACAMQ14CZ8 416 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 MAPRE2Q15555 327 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 UGT8Q16880 541 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 VPS26BQ4G0F5 336 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 C18orf63Q68DL7 685 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 GLB1L3Q8NCI6 653 aaPredicted RBP13.83□□□□□ -0.2
TNF-208ENST00000449264 STARD8Q92502 1023 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 VPS33AQ96AX1 596 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 YIPF2Q9BWQ6 316 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 REEP4Q9H6H4 257 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 FBXO8Q9NRD0 319 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 SH3BP4Q9P0V3 963 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 EXO1Q9UQ84 846 aaKnown RBP13.83□□□□□ -0.2
TNF-208ENST00000449264 TMEM184BQ9Y519 407 aaPredicted RBP13.83□□□□□ -0.2
TNF-208ENST00000449264 SPACA6W5XKT8 324 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 PTPRBP23467 1997 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 PIEZO1Q92508 2521 aa13.83□□□□□ -0.2
TNF-208ENST00000449264 PLD2O14939 933 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 CHST10O43529 356 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 SNRPB2P08579 225 aaKnown RBP13.82□□□□□ -0.2
TNF-208ENST00000449264 FURINP09958 794 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 PIM1P11309 404 aaPredicted RBP13.82□□□□□ -0.2
TNF-208ENST00000449264 DDCP20711 480 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 TARDBPQ13148 414 aaKnown RBP eCLIP13.82□□□□□ -0.2
TNF-208ENST00000449264 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
TNF-208ENST00000449264 KRT72Q14CN4 511 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
TNF-208ENST00000449264 ARHGAP40Q5TG30 622 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 RHBDD2Q6NTF9 364 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 FAM180BQ6P0A1 224 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 BLOC1S3Q6QNY0 202 aa13.82□□□□□ -0.2
TNF-208ENST00000449264 BPHLQ86WA6 291 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms