RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	DAPK2	Q9UIK4	370 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	HCN4	Q9Y3Q4	1203 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	EDDM13	A0A1B0GTR0	161 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	PCDH17	O14917	1159 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	LZTS3	O60299	673 aa	Predicted RBP	16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	TBX6	O95947	436 aa	Predicted RBP	16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	CDH3	P22223	829 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	CBL	P22681	906 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	BMPR1A	P36894	532 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	IDH2	P48735	452 aa	Known RBP	16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	DSTN	P60981	165 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	TMEM52B	Q4KMG9	183 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	PDZD3	Q86UT5	571 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	PLD3	Q8IV08	490 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	KRT78	Q8N1N4	520 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	RAD51AP1	Q96B01	352 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	NEURL2	Q9BR09	285 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	CXorf36	Q9H7Y0	433 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	AMBN	Q9NP70	447 aa		16.16	■□□□□ 0.18
TOM1-210	ENST00000449058	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	16.16	■□□□□ 0.18	2e-7	■■■■■ 54.4
TOM1-210	ENST00000449058	TRBC2	A0A5B9	178 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ARRDC5	A6NEK1	342 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	FUT4	P22083	530 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	KEL	P23276	732 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	CTNNB1	P35222	781 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	TUBA1B	P68363	451 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	TIGD6	Q17RP2	521 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	FNDC3B	Q53EP0	1204 aa	Known RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ZNF697	Q5TEC3	545 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	TUBA1A	Q71U36	451 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	MINDY2	Q8NBR6	621 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	OR5AR1	Q8NGP9	310 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	PDXP	Q96GD0	296 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	PPP1R16A	Q96I34	528 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	DACH2	Q96NX9	599 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	FAM129B	Q96TA1	746 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ZNF717	Q9BY31	904 aa	Predicted RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	DCSTAMP	Q9H295	470 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	RHBG	Q9H310	441 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ZNF556	Q9HAH1	456 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	CHCHD3	Q9NX63	227 aa	Known RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	GPR83	Q9NYM4	423 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	RAB23	Q9ULC3	237 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ASF1A	Q9Y294	204 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	PLPP1	O14494	284 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	AIRE	O43918	545 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	GADD45G	O95257	159 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ERG	P11308	486 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	RHCE	P18577	417 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	CTSK	P43235	329 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ELAVL3	Q14576	367 aa	Known RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	SLC46A3	Q7Z3Q1	461 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ADGRF3	Q8IZF5	1079 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ZNF784	Q8NCA9	323 aa	Predicted RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	SP7	Q8TDD2	431 aa	Predicted RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	APOBEC4	Q8WW27	367 aa	Known RBP	16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	ARMC7	Q9H6L4	198 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	AHSP	Q9NZD4	102 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	KCND3	Q9UK17	655 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	PLAGL1	Q9UM63	463 aa		16.15	■□□□□ 0.18
TOM1-210	ENST00000449058	TBX19	O60806	448 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	SEMA3D	O95025	777 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	CCNB2	O95067	398 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	DDC	P20711	480 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	SLC6A11	P48066	632 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	NUDT6	P53370	316 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	HTRA3	P83110	453 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	RPA4	Q13156	261 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	IRF3	Q14653	427 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	PERM1	Q5SV97	790 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	SAXO2	Q658L1	398 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	REEP3	Q6NUK4	255 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	ERN2	Q76MJ5	926 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	PAGE2	Q7Z2X7	111 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	UTP15	Q8TED0	518 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	ZNF707	Q96C28	371 aa	Predicted RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	PAWR	Q96IZ0	340 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	COL21A1	Q96P44	957 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	NLN	Q9BYT8	704 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	DSN1	Q9H410	356 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	C11orf49	Q9H6J7	331 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	GIN1	Q9NXP7	522 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	PNMA8B	Q9ULN7	279 aa	Predicted RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	MRPS23	Q9Y3D9	190 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	FAM32A	Q9Y421	112 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	TMEM247	A6NEH6	219 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	STS	P08842	583 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	GADD45A	P24522	165 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	CLK1	P49759	484 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	EIF4H	Q15056	248 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	GAB4	Q2WGN9	574 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	FBXO43	Q4G163	708 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	DEPDC1	Q5TB30	811 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	KHDRBS2	Q5VWX1	349 aa	Known RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	ZNF770	Q6IQ21	691 aa	Predicted RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	DCUN1D3	Q8IWE4	304 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	C2orf73	Q8N5S3	287 aa	Predicted RBP	16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	ZNF675	Q8TD23	568 aa		16.14	■□□□□ 0.17
TOM1-210	ENST00000449058	NEURL3	Q96EH8	262 aa		16.14	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms