RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 HIST1H2ADP20671 130 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 ITGAXP20702 1163 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 RPA3P35244 121 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 RPL21P46778 160 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 TAP2Q03519 686 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PRDX1Q06830 199 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PDIA2Q13087 525 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 GPS2Q13227 327 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 SRSF6Q13247 344 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 NAB1Q13506 487 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 NCF4Q15080 339 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 WHAMMP3Q1A5X7 153 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 GARNL3Q5VVW2 1013 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PRMT9Q6P2P2 845 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 FBXO38Q6PIJ6 1188 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 SYT10Q6XYQ8 523 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 RNF44Q7L0R7 432 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 TRIM73Q86UV7 250 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 HPS6Q86YV9 775 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 UNC5BQ8IZJ1 945 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CNPY4Q8N129 248 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 ZNF843Q8N446 348 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 NKAPQ8N5F7 415 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 OR52N2Q8NGI0 321 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 OR2A1Q8NGT9 310 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PYROXD1Q8WU10 500 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 ATL1Q8WXF7 558 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CDKL2Q92772 493 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 HIST1H2AHQ96KK5 128 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 GBP5Q96PP8 586 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 HIST1H2AJQ99878 128 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 TRIM51Q9BSJ1 452 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 H2AFJQ9BTM1 129 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 SLC25A18Q9H1K4 315 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CHST8Q9H2A9 424 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 ACTL8Q9H568 366 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PARVBQ9HBI1 364 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PLAC1Q9HBJ0 212 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 POPDC3Q9HBV1 291 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PPANQ9NQ55 473 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CDC23Q9UJX2 597 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 PLAGL1Q9UM63 463 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CDC14AQ9UNH5 594 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 CHMP2BQ9UQN3 213 aa7.39□□□□□ -1.23
SMARCE1-206ENST00000447024 NBASA2RRP1 2371 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 A0A1B0GX78 115 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CCDC189A1A4V9 331 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MKRN2OSH3BPM6 223 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 DSCR3O14972 297 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 PRPF4O43172 522 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 RAD51CO43502 376 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 RFPL1O75677 317 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CAPN1P07384 714 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 F8A1P23610 371 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 GABRB3P28472 473 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 BDKRB1P46663 353 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CARSP49589 748 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 PMS2P54278 862 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 POLE2P56282 527 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MPP1Q00013 466 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MUM1Q2TAK8 710 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 NKAIN1Q4KMZ8 207 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 GLE1Q53GS7 698 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CDKL4Q5MAI5 379 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 FAM198BQ6UWH4 519 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 UBE2R2Q712K3 238 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MED25Q71SY5 747 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CCDC91Q7Z6B0 441 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 ZC3HC1Q86WB0 502 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 RAB43Q86YS6 212 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CPNE9Q8IYJ1 553 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 EXD3Q8N9H8 876 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 TTC29Q8NA56 475 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 SLC38A9Q8NBW4 561 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 FBXO36Q8NEA4 188 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 ZNF480Q8WV37 535 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 IL17FQ96PD4 163 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 PKP4Q99569 1192 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 SELENOSQ9BQE4 189 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 HAUS8Q9BT25 410 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 TRIM31Q9BZY9 425 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 SLC26A1Q9H2B4 701 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 RHOJQ9H4E5 214 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 SERHL2Q9H4I8 314 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 WDR54Q9H977 334 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MRPS30Q9NP92 439 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 CCDC177Q9NQR7 707 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 TMEM184CQ9NVA4 438 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 IFT80Q9P2H3 777 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 TXNDC16Q9P2K2 825 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 GALPQ9UBC7 116 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 RALYQ9UKM9 306 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 G3BP2Q9UN86 482 aaKnown RBP7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 MAN2B2Q9Y2E5 1009 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 SNX24Q9Y343 169 aa7.38□□□□□ -1.23
SMARCE1-206ENST00000447024 PCDHGA9Q9Y5G4 932 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms