RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CYP2A6P11509 494 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 PPIGQ13427 754 aaKnown RBP eCLIP7.59□□□□□ -1.197e-7■■□□□ 12.6
SMG1-202ENST00000446231 METTL17Q9H7H0 456 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 UFSP2Q9NUQ7 469 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 MRPL15Q9P015 296 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 PSORS1C1Q9UIG5 152 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CA5BQ9Y2D0 317 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 DIP2AQ14689 1571 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 F8W036 122 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ADAM8P78325 824 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 BLOC1S1P78537 153 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 TECRLQ5HYJ1 363 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 L3HYPDHQ96EM0 354 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 LRRC46Q96FV0 321 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 TSGA13Q96PP4 275 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ZCCHC2Q9C0B9 1178 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 FN3KQ9H479 309 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 PLSCR3Q9NRY6 295 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 RB1P06400 928 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SKP1P63208 163 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 IL10RBQ08334 325 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SDR16C5Q8N3Y7 309 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 C3orf30Q96M34 536 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SLCO3A1Q9UIG8 710 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 RAB19A4D1S5 217 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 MED27Q6P2C8 311 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 ARMC10Q8N2F6 343 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 A0A1W2PQH9 124 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 KRT33AO76009 404 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 CD79BP40259 229 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 RAB11BQ15907 218 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 WDR53Q7Z5U6 358 aaPredicted RBP7.59□□□□□ -1.2
SMG1-202ENST00000446231 OR7G2Q8NG99 324 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 ELP3Q9H9T3 547 aa7.59□□□□□ -1.2
SMG1-202ENST00000446231 FABP7O15540 132 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SEPT4O43236 478 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 KLK1P06870 262 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 NFYAP23511 347 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 BAK1Q16611 211 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 USP51Q70EK9 711 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GALNT10Q86SR1 603 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 KCTD13Q8WZ19 329 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SMIM28A0A1B0GU29 152 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 POMCP01189 267 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ALDOBP05062 364 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 C8GP07360 202 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 TPMTP51580 245 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ABRAXAS2Q15018 415 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 IGSF11Q5DX21 431 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 KRBOX4Q5JUW0 171 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 TIGD3Q6B0B8 471 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 CNTN4Q8IWV2 1026 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PSMG2Q969U7 264 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PRKYO43930 277 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 EPOP01588 193 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 KHKP50053 298 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ELP2Q6IA86 826 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ZCCHC12Q6PEW1 402 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ARL11Q969Q4 196 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 RAD51AP1Q96B01 352 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 NARFLQ9H6Q4 476 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 AGTR1P30556 359 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 KDELR2P33947 212 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 CXCR3P49682 368 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FKBP1AP62942 108 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 DUSP6Q16828 381 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SFRP4Q6FHJ7 346 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 COQ8BQ96D53 544 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GLIS2Q9BZE0 524 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 LSM7Q9UK45 103 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 C13orf42A0A1B0GVH6 325 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 OR1I1O60431 355 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FGBP02675 491 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PTPRAP18433 802 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 STC1P52823 247 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 TBCEQ15813 527 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 JAZF1Q86VZ6 243 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SIAH3Q8IW03 269 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SMAP2Q8WU79 429 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 FZD8Q9H461 694 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GSTO2Q9H4Y5 243 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 POLR1DQ9Y2S0 133 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ZFC3H1O60293 1989 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 CD8B2A6NJW9 211 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ARPC1BO15143 372 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 HPGDSO60760 199 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 CD8BP10966 210 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PDHA2P29803 388 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 NRIP1P48552 1158 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 CTF1Q16619 201 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 HCAR2Q8TDS4 363 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GALNT9Q9HCQ5 603 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FAM120CQ9NX05 1096 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 ALDH1A1P00352 501 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 PYCR1P32322 319 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 DLX5P56178 289 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 OR4F3Q6IEY1 312 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 IQCF1Q8N6M8 205 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms