RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SFTPDP35247 375 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 PTGER3P43115 390 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAGEA11P43364 429 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 TNFRSF4P43489 277 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 NUMBP49757 651 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 KCNK10P57789 538 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 SNX1Q13596 522 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ITPRIPL2Q3MIP1 535 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 SLC36A3Q495N2 470 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 STPG1Q5TH74 334 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 NKAIN2Q5VXU1 208 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 CTR9Q6PD62 1173 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 FAM159AQ6UWV7 190 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 DCUN1D3Q8IWE4 304 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 CENPLQ8N0S6 344 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR52K2Q8NGK3 314 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF473Q8WTR7 871 aaKnown RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 UBTD2Q8WUN7 234 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAGED4Q96JG8 741 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 TRAF4Q9BUZ4 470 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 NACAP1Q9BZK3 213 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZBTB20Q9HC78 741 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 TM9SF3Q9HD45 589 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 TCF7L2Q9NQB0 619 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 YAE1D1Q9NRH1 226 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 OLFML3Q9NRN5 406 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 PTTG2Q9NZH5 202 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 MRPS7Q9Y2R9 242 aaKnown RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 NSG2Q9Y328 171 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ADGRL1O94910 1474 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CFTRP13569 1480 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 A0A0U1RQV5 110 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 A0A1B0GUL7 405 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANTXRLA6NF34 631 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 H3BMM5 538 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCL24O00175 119 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 EEF2KO00418 725 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 NUDT21O43809 227 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CSO75390 466 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 RHOBTB1O94844 696 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PIGNO95427 931 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 TOP1P11387 765 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 FGF5P12034 268 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 TNNI3P19429 210 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 DRD5P21918 477 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANOS1P23352 680 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PTPN4P29074 926 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 GDI1P31150 447 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 SRD5A2P31213 254 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 STIP1P31948 543 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 OTX2P32243 289 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 DUTP33316 252 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR3A3P47888 321 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCL11P51671 97 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 DVL1P1P54792 670 aaPredicted RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 UBE2HP62256 183 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCNA1P78396 465 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 BEX3Q00994 111 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 TAF10Q12962 218 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CDH18Q13634 790 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCDC152Q4G0S7 254 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CMPK2Q5EBM0 449 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 TECRLQ5HYJ1 363 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ARHGEF16Q5VV41 709 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 IL23RQ5VWK5 629 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ARHGAP11AQ6P4F7 1023 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZYG11AQ6WRX3 759 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCDC73Q6ZRK6 1079 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 USP43Q70EL4 1123 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PRUNE1Q86TP1 453 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZDHHC21Q8IVQ6 265 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CDH26Q8IXH8 852 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF679Q8IYX0 411 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CDK20Q8IZL9 346 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF444Q8N0Y2 327 aaPredicted RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRRC17Q8N6Y2 441 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 STEAP2Q8NFT2 490 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR56B2PQ8NGI1 322 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 GLYATL1Q969I3 302 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 RBM41Q96IZ5 413 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 RPGRIP1Q96KN7 1286 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 GPR137Q96N19 417 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PGLYRP2Q96PD5 576 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 UHRF2Q96PU4 802 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCDC3Q9BQI4 270 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 C5orf66Q9H5L9 145 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 RNF121Q9H920 327 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRRC40Q9H9A6 602 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PELI2Q9HAT8 420 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 GTSE1Q9NYZ3 720 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 RAI14Q9P0K7 980 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 VPS54Q9P1Q0 977 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ATP6V1HQ9UI12 483 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 FAF1Q9UNN5 650 aaPredicted RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ERVK-19Q9WJR5 959 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 MRPS2Q9Y399 296 aaKnown RBP4□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAB21L2Q9Y586 359 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 PEG3Q9GZU2 1588 aa4□□□□□ -1.77
HMGB1P48-201ENST00000446155 ABCC4O15439 1325 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms