RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 HDHD5Q9BXW7 423 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 NMNAT1Q9HAN9 279 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-203ENST00000444191 PTGFRNQ9P2B2 879 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 CORO2BQ9UQ03 480 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 CLCA2Q9UQC9 943 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 Q9Y3F1 56 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 SPTBP11277 2137 aa11.16□□□□□ -0.62
HCFC1-203ENST00000444191 SCAMP2O15127 329 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 MAPK8P45983 427 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 NRIP1P48552 1158 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 HNMTP50135 292 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 ITGA1P56199 1179 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 MAP4K2Q12851 820 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 EIF4EBP2Q13542 120 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 LRRC26Q2I0M4 334 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 KLHL6Q8WZ60 621 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 YIPF6Q96EC8 236 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 TSSK6Q9BXA6 273 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 CXXC1Q9P0U4 656 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 NDRG4Q9ULP0 352 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 PRAMEF33A0A0G2JMD5 474 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 METTL15A6NJ78 407 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 LRRTM2O43300 516 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 PRAMEF10O60809 474 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 DNAJB5O75953 348 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 GASTP01350 101 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 LHCGRP22888 699 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 HOXA9P31269 272 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 NXNL2Q5VZ03 156 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 CHST9Q7L1S5 443 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 SERPINA11Q86U17 422 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 PTOV1Q86YD1 416 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 FAM20CQ8IXL6 584 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 PCNPQ8WW12 178 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 LINC01599Q8WXQ3 324 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 PIK3R3Q92569 461 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 TMCO6Q96DC7 493 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 TM9SF2Q99805 663 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 CDADC1Q9BWV3 514 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 C1QTNF3Q9BXJ4 246 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 SLC12A9Q9BXP2 914 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 MRPL9Q9BYD2 267 aaKnown RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 RACGAP1Q9H0H5 632 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 RANGRFQ9HD47 186 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-203ENST00000444191 GULP1Q9UBP9 304 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 ATG2BQ96BY7 2078 aa11.15□□□□□ -0.62
HCFC1-203ENST00000444191 TRBV23OR9-2A0A075B6M9 112 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 A0A1W2PQL4 384 aaPredicted RBP11.15□□□□□ -0.63
HCFC1-203ENST00000444191 HAT1O14929 419 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 LEFTY1O75610 366 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 PCDH8O95206 1070 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 CYBAP13498 195 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 WASP42768 502 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 CRISP1P54107 249 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 HEPACAMQ14CZ8 416 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 MPPE1Q53F39 396 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 OR2G6Q5TZ20 316 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 PNCKQ6P2M8 343 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 C22orf39Q6P5X5 142 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 TMEM25Q86YD3 366 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.63
HCFC1-203ENST00000444191 CADM2Q8N3J6 435 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 GEMIN6Q8WXD5 167 aaKnown RBP11.15□□□□□ -0.63
HCFC1-203ENST00000444191 KLK6Q92876 244 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 VMP1Q96GC9 406 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 RHBGQ9H310 441 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 NLKQ9UBE8 527 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 PSORS1C1Q9UIG5 152 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 MKLN1Q9UL63 735 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 GSTK1Q9Y2Q3 226 aa11.15□□□□□ -0.63
HCFC1-203ENST00000444191 FEZF1A0PJY2 475 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
HCFC1-203ENST00000444191 M0R082 166 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 M0R3H8 397 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 YY2O15391 372 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 CELP19835 753 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 TBPL1P62380 186 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 HOXC5Q00444 222 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 MGAT3Q09327 533 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF763Q0D2J5 394 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 DUSP7Q16829 419 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 CEP78Q5JTW2 689 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 RD3Q7Z3Z2 195 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 DNAJB8Q8NHS0 232 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 F2RL3Q96RI0 385 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 ZCCHC3Q9NUD5 404 aaKnown RBP11.14□□□□□ -0.63
HCFC1-203ENST00000444191 MARCH5Q9NX47 278 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 SLC45A1Q9Y2W3 748 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 YARS2Q9Y2Z4 477 aaKnown RBP11.14□□□□□ -0.63
HCFC1-203ENST00000444191 GPSM3Q9Y4H4 160 aa11.14□□□□□ -0.63
HCFC1-203ENST00000444191 CACNA1IQ9P0X4 2223 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms