RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PTGES2Q9H7Z7 377 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 TNFRSF11BO00300 401 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 XKRYO14609 159 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ADAMDEC1O15204 470 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 SRPX2O60687 465 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 BCL10O95999 233 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 CD63P08962 238 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 NCK1P16333 377 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 YAP1P46937 504 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 EEFSECP57772 596 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 INAQ16352 499 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 PPP1R3AQ16821 1122 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.48□□□□□ -0.255e-10■■■□□ 16.7
SMARCA4-204ENST00000444061 TLDC1Q6P9B6 456 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 GAL3ST3Q96A11 431 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 GMPPBQ9Y5P6 360 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ELOA3DA6NLF2 546 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 CPNE6O95741 557 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 BNIP1Q12981 228 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 TRIM25Q14258 630 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 GBX1Q14549 363 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 C16orf72Q14CZ0 275 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 RFX4Q33E94 735 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ZIK1Q3SY52 487 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ELOA3BQ3SY89 546 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 IER5LQ5T953 404 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ARL14Q8N4G2 192 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 PDPRQ8NCN5 879 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ELOA3Q8NG57 546 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 OR2L5Q8NG80 312 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 TRIM63Q969Q1 353 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 DNAJC15Q9Y5T4 150 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 OTOFQ9HC10 1997 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 TET1Q8NFU7 2136 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM86C2PA6NEL3 165 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 CLEC3AO75596 197 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 UGT2B7P16662 529 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF311Q5JNZ3 666 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 DEPDC4Q8N2C3 294 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 LDAHQ9H6V9 325 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 STARD5Q9NSY2 213 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 OR51B4Q9Y5P0 310 aa13.48□□□□□ -0.25
SMARCA4-204ENST00000444061 PCDHGA12O60330 932 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RDH16O75452 317 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 HSMCR30P0CW71 290 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GALNT1Q10472 559 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 BLMHQ13867 455 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 SERTAD2Q14140 314 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GRB7Q14451 532 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 DCAF12Q5T6F0 453 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ATG9BQ674R7 924 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ALG1LQ6GMV1 187 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RINLQ6ZS11 566 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 NUP54Q7Z3B4 507 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 PIGXQ8TBF5 258 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CHRDQ9H2X0 955 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 NECTIN3Q9NQS3 549 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CTPS2Q9NRF8 586 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 USE1Q9NZ43 259 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 PTGDR2Q9Y5Y4 395 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 G3V2L1 256 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 TIPRLO75663 272 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 SERPINA1P01009 418 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RPS17P08708 135 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF888P0CJ79 500 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CXCR1P25024 350 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GABRB3P28472 473 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 NR1H2P55055 460 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 LETMD1Q6P1Q0 360 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 TMEM92Q6UXU6 159 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CCDC103Q8IW40 242 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM217AQ8IXS0 508 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CADM4Q8NFZ8 388 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 OR52J3Q8NH60 311 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RELTQ969Z4 430 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 CD180Q99467 661 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GIN1Q9NXP7 522 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GPIP06744 558 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF24P17028 368 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 SNTA1Q13424 505 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 TMEM215Q68D42 235 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 OR10H5Q8NGA6 315 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ZBTB26Q9HCK0 441 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 EMC8O43402 210 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 MGRN1O60291 552 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms