RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 HECTD2Q5U5R9 776 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 RTL4Q6ZR62 310 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 TBC1D19Q8N5T2 526 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 TRPV3Q8NET8 790 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 SLC5A11Q8WWX8 675 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF669Q96BR6 464 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-208ENST00000443046 SGCZQ96LD1 299 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 ADAP2Q9NPF8 381 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 SPRR3Q9UBC9 169 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 FBXO5Q9UKT4 447 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
HMGN1-208ENST00000443046 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 WWP2O00308 870 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 UQCRC1P31930 480 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 CEACAM8P31997 349 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 RGS4P49798 205 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 HNRNPFP52597 415 aaKnown RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 HK2P52789 917 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 AP1S2P56377 157 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 CSHL1Q14406 222 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 HSPB2Q16082 182 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 KCTD19Q17RG1 926 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 CASC4Q6P4E1 433 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 PAQR3Q6TCH7 311 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 TMEM139Q8IV31 216 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 AGGF1Q8N302 714 aaeCLIP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 NAXEQ8NCW5 288 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 OR8K3Q8NH51 312 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 RNASE6Q93091 150 aaKnown RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 FBXL8Q96CD0 374 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 NPLQ9BXD5 320 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 PELI2Q9HAT8 420 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 SEMA4BQ9NPR2 832 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 TRMT6Q9UJA5 497 aaKnown RBP13.31□□□□□ -0.28
HMGN1-208ENST00000443046 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
HMGN1-208ENST00000443046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ATP6AP2A0A1C7CYW4 349 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 SDR42E2A6NKP2 422 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 KIAA1324LA8MWY0 1029 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ATP6AP2O75787 350 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 HIST1H2AGP0C0S8 130 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 EPXP11678 715 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 MLNP12872 115 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 HIST1H2ADP20671 130 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ADSLP30566 484 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 KCNJ1P48048 391 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ASCL1P50553 236 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 KEAP1Q14145 624 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ELAVL1Q15717 326 aaKnown RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 HSDL2Q6YN16 418 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 CHSY3Q70JA7 882 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 GSTA5Q7RTV2 222 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 PALM2Q8IXS6 379 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 MYO1HQ8N1T3 1032 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 TMEM132CQ8N3T6 1108 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 PTPMT1Q8WUK0 201 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 HIST1H2AHQ96KK5 128 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 HIST1H2AJQ99878 128 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 H2AFJQ9BTM1 129 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 PRTFDC1Q9NRG1 225 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 SACM1LQ9NTJ5 587 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ARL15Q9NXU5 204 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 FOXD3Q9UJU5 478 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ATG4BQ9Y4P1 393 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 FREM3P0C091 2139 aa13.3□□□□□ -0.28
HMGN1-208ENST00000443046 ANK3Q12955 4377 aaKnown RBP13.29□□□□□ -0.28
HMGN1-208ENST00000443046 TRGV5A0A0B4J1U4 118 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 SYNDIG1LA6NDD5 238 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 CYR61O00622 381 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 CCL3P10147 92 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 GABRB3P28472 473 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 MAGEA3P43357 314 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 RAB38P57729 211 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 BTN3A2P78410 334 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 TOR1AIP1Q5JTV8 583 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 NXPE4Q6UWF7 544 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 FAM47EQ6ZV65 393 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 TAOK1Q7L7X3 1001 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF321PQ8N8H1 164 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 CALML6Q8TD86 181 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 ATL1Q8WXF7 558 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 LINGO1Q96FE5 620 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms