RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZNF24P17028 368 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TFEBP19484 476 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CAPN3P20807 821 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 MST1P26927 711 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 COL8A1P27658 744 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SSTR2P30874 369 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CASQ1P31415 396 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SLC6A12P48065 614 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PIK3CGP48736 1102 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 WDR4P57081 412 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 RAB10P61026 200 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TSNQ15631 228 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 PDK4Q16654 411 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 FCRLBQ6BAA4 426 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 MED27Q6P2C8 311 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CTAGE3PQ8IX95 158 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CYP4Z2PQ8N1L4 340 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 OR5T3Q8NGG3 340 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ASB15Q8WXK1 588 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TSLPQ969D9 159 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 MS4A6EQ96DS6 147 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 WDR34Q96EX3 536 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CMTM7Q96FZ5 175 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CCDC120Q96HB5 630 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SGCZQ96LD1 299 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SIGLEC12Q96PQ1 595 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 USB1Q9BQ65 265 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 VKORC1Q9BQB6 163 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SYNPO2LQ9H987 977 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SAYSD1Q9NPB0 183 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NUDT4Q9NZJ9 180 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 COPS7AQ9UBW8 275 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TMCO1Q9UM00 188 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PPIEQ9UNP9 301 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 SH2B3Q9UQQ2 575 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SPTBN1Q01082 2364 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 ICE1Q9Y2F5 2266 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 A0A087X1B8 175 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 IGKV3D-11A0A0A0MRZ8 115 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 TRBV11-1A0A0K0K1C0 115 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 A8MVJ9 347 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 FOXO6A8MYZ6 492 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 MYO1DO94832 1006 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 TUBB4AP04350 444 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 F7P08709 466 aaPredicted RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 RNF224P0DH78 156 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PHBP35232 272 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PTGS2P35354 604 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 CASP2P42575 452 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 RPL21P46778 160 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 OLR1P78380 273 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 FAM83EQ2M2I3 478 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 NDUFAF5Q5TEU4 345 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 HIST2H2BCQ6DN03 193 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 METTL2BQ6P1Q9 378 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 KLC3Q6P597 504 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 OPN5Q6U736 354 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 HSDL2Q6YN16 418 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 ACAD11Q709F0 780 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 ANKRD53Q8N9V6 530 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PDPRQ8NCN5 879 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 NFAM1Q8NET5 270 aaPredicted RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 ITLN2Q8WWU7 325 aaPredicted RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 TANKQ92844 425 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 MTFMTQ96DP5 389 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 GPR22Q99680 433 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 RBBP8Q99708 897 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 TRIM51Q9BSJ1 452 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 RBCK1Q9BYM8 510 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 CD244Q9BZW8 370 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 WDR41Q9HAD4 459 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 HPF1Q9NWY4 346 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PSD3Q9NYI0 1048 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PHF11Q9UIL8 331 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 PTBP2Q9UKA9 531 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 MEMO1Q9Y316 297 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 TNPO3Q9Y5L0 923 aaKnown RBP7.26□□□□□ -1.25
CD44-211ENST00000442151 SCN2AQ99250 2005 aa7.26□□□□□ -1.25
CD44-211ENST00000442151 A8MUA0 341 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 CAPN14A8MX76 684 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 FANCGO15287 622 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 PEX1O43933 1283 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 CCNT2O60583 730 aaKnown RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 NEURL1O76050 574 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 HOXD4P09016 255 aaPredicted RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 EPB42P16452 691 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 MAOAP21397 527 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 PTX3P26022 381 aaPredicted RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 ELAVL4P26378 380 aaKnown RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 TNFRSF8P28908 595 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 RAP1GDS1P52306 607 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 BTG2P78543 158 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 PLGLB1Q02325 96 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 PCDH1Q08174 1060 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 SF3B4Q15427 424 aaKnown RBP eCLIP7.25□□□□□ -1.25
CD44-211ENST00000442151 C3AR1Q16581 482 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 ZXDCQ2QGD7 858 aaPredicted RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 ADPRMQ3LIE5 342 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms