RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 NR1H2P55055 460 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ILF2Q12905 390 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 E2F2Q14209 437 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 KCNJ8Q15842 424 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RBBP7Q16576 425 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 C6orf163Q5TEZ5 329 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 GARNL3Q5VVW2 1013 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 FAM91A1Q658Y4 838 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 TAS2R42Q7RTR8 314 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 MCATQ8IVS2 390 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 DNAAF3Q8N9W5 541 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 LMNTD1Q8N9Z9 388 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ICA1LQ8NDH6 482 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ELMO1Q92556 727 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 EBNA1BP2Q99848 306 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SLC6A20Q9NP91 592 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ABI3Q9P2A4 366 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ATPIF1Q9UII2 106 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 FBXL4Q9UKA2 621 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 MTO1Q9Y2Z2 717 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ICE1Q9Y2F5 2266 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PCSK5Q92824 1860 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 POM121CA8CG34 1229 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ISM1B1AKI9 464 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 H3BMM5 538 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 H3BNX3 289 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CNOT3O75175 753 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 GPC4O75487 556 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SLCO2B1O94956 709 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CCNDBP1O95273 360 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 TNFAIP8O95379 198 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 APOA4P06727 396 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 KRT15P19012 456 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RPS3P23396 243 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CNTFP26441 200 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CPOXP36551 454 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RBPJQ06330 500 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RUNX1T1Q06455 604 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CDH17Q12864 832 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 NKG7Q16617 165 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SPANXN3Q5MJ09 141 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 OGFRL1Q5TC84 451 aaPredicted RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 IL23RQ5VWK5 629 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 ZNF324BQ6AW86 544 aaPredicted RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 NIPAL1Q6NVV3 410 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 GALNT4Q8N4A0 578 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 HIPK4Q8NE63 616 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 OR13C4Q8NGS5 318 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 DNAJB14Q8TBM8 379 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 HAS2Q92819 552 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RAD51AP1Q96B01 352 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 RBM18Q96H35 190 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PLEKHA8Q96JA3 519 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 TGIF2Q9GZN2 237 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SPRTNQ9H040 489 aaPredicted RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 PAIP1Q9H074 479 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 EHD1Q9H4M9 534 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SACM1LQ9NTJ5 587 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CUTCQ9NTM9 273 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 TBC1D23Q9NUY8 699 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SLC17A7Q9P2U7 560 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 TEX264Q9Y6I9 313 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 SPTBN1Q01082 2364 aaKnown RBP5.72□□□□□ -1.49
PTPRR-204ENST00000440835 FER1L5A0AVI2 2057 aa5.72□□□□□ -1.49
PTPRR-204ENST00000440835 CPAMD8Q8IZJ3 1885 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 INMTO95050 263 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 ZNF12P17014 697 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 CAPN3P20807 821 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 PDHA2P29803 388 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 SOX11P35716 441 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 GSSP48637 474 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 TTPAP49638 278 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 OCA2Q04671 838 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 ARHGAP19Q14CB8 494 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 PRR30Q53SZ7 412 aaPredicted RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 HP1BP3Q5SSJ5 553 aaPredicted RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 FIGLAQ6QHK4 219 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 NDUFAF7Q7L592 441 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 EID3Q8N140 333 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 ZNF808Q8N4W9 903 aaPredicted RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 ZNF655Q8N720 491 aaPredicted RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 OR5AR1Q8NGP9 310 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 CHPT1Q8WUD6 406 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 ALKBH8Q96BT7 664 aaKnown RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 C19orf60Q96EN9 201 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 COG8Q96MW5 612 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 TCF12Q99081 682 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 SPSB2Q99619 263 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 IL22Q9GZX6 179 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 MANSC1Q9H8J5 431 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 FAM60AQ9NP50 221 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 MRGBPQ9NV56 204 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 RIC8BQ9NVN3 520 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 PPP1R14DQ9NXH3 145 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 TXNDC16Q9P2K2 825 aa5.71□□□□□ -1.49
PTPRR-204ENST00000440835 MRPS2Q9Y399 296 aaKnown RBP5.71□□□□□ -1.49
PTPRR-204ENST00000440835 DTNAQ9Y4J8 743 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms