RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SULT1C3Q6IMI6 304 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 ABHD17CQ6PCB6 329 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 PAOXQ6QHF9 649 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 NCCRP1Q6ZVX7 275 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-219ENST00000440240 FAM47BQ8NA70 645 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 DAZLQ92904 295 aaKnown RBP19.31■□□□□ 0.68
CPNE1-219ENST00000440240 PTCD3Q96EY7 689 aaKnown RBP19.31■□□□□ 0.68
CPNE1-219ENST00000440240 C14orf79Q96F83 325 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 COPS7BQ9H9Q2 264 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-219ENST00000440240 RNF14Q9UBS8 474 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 DAPP1Q9UN19 280 aa19.31■□□□□ 0.68
CPNE1-219ENST00000440240 MTO1Q9Y2Z2 717 aaKnown RBP19.31■□□□□ 0.68
CPNE1-219ENST00000440240 USP27XA6NNY8 438 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 A8MVJ9 347 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 TGFBR3LH3BV60 316 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 CYR61O00622 381 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 CDC40O60508 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 TBX6O95947 436 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 IFNA16P05015 189 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 TPOP07202 933 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 CCDC166P0CW27 439 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 CAPN3P20807 821 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 PPP2R1BP30154 601 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 HNRNPFP52597 415 aaKnown RBP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 LIM2P55344 173 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 LAPTM5Q13571 262 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 HIST2H2ACQ16777 129 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 XKR6Q5GH73 641 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 PAGE2BQ5JRK9 111 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 HIST2H2AA3Q6FI13 130 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 ARHGAP11AQ6P4F7 1023 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 MORN4Q8NDC4 146 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 TMEM52Q8NDY8 209 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 SRFBP1Q8NEF9 429 aaKnown RBP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 C7orf57Q8NEG2 295 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 KIAA1191Q96A73 305 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 EFCAB11Q9BUY7 163 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 ROGDIQ9GZN7 287 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 ENKD1Q9H0I2 346 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 PLSCR2Q9NRY7 297 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 HPF1Q9NWY4 346 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 KCMF1Q9P0J7 381 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 MYOTQ9UBF9 498 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 VTI1BQ9UEU0 232 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 ZNF490Q9ULM2 529 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-219ENST00000440240 SNX24Q9Y343 169 aa19.3■□□□□ 0.68
CPNE1-219ENST00000440240 OR2J2O76002 312 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 WISP3O95389 354 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-219ENST00000440240 STMN1P16949 149 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 RPL21P46778 160 aaKnown RBP19.29■□□□□ 0.68
CPNE1-219ENST00000440240 KCNC1P48547 511 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 GPR85P60893 370 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 STX4Q12846 297 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 DOC2AQ14183 400 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 PDK4Q16654 411 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 HSDL2Q6YN16 418 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 CYS1Q717R9 158 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 VN1R5Q7Z5H4 357 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 CD163Q86VB7 1156 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 SPATA6LQ8N4H0 392 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 SNX31Q8N9S9 440 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 PSD4Q8NDX1 1056 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 CHTF18Q8WVB6 975 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 ASB15Q8WXK1 588 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 WDR34Q96EX3 536 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 KCNC2Q96PR1 638 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 NAPGQ99747 312 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-219ENST00000440240 TMEM79Q9BSE2 394 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 ALOXE3Q9BYJ1 711 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 CAB39LQ9H9S4 337 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 SMYD2Q9NRG4 433 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 CD274Q9NZQ7 290 aa19.29■□□□□ 0.68
CPNE1-219ENST00000440240 PRKNO60260 465 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-219ENST00000440240 PIAS1O75925 651 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 CD1DP15813 335 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 CERS1P27544 350 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 HSPA7P48741 367 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 SERTAD2Q14140 314 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 RGS9BPQ6ZS82 235 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 CAPN12Q6ZSI9 719 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 CLNKQ7Z7G1 428 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 OR52N2Q8NGI0 321 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 OR14A16Q8NHC5 309 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 ASB5Q8WWX0 329 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 ESAMQ96AP7 390 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 F2RL3Q96RI0 385 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 KRT12Q99456 494 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 CPNE1Q99829 537 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 TP63Q9H3D4 680 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-219ENST00000440240 LYRM4Q9HD34 91 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 PRDM7Q9NQW5 492 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 PTBP2Q9UKA9 531 aaKnown RBP19.28■□□□□ 0.68
CPNE1-219ENST00000440240 F8P00451 2351 aa19.28■□□□□ 0.68
CPNE1-219ENST00000440240 TMEM200CA6NKL6 621 aa19.27■□□□□ 0.68
CPNE1-219ENST00000440240 PHGDHO43175 533 aaKnown RBP19.27■□□□□ 0.68
CPNE1-219ENST00000440240 PRAMEF4O60810 478 aa19.27■□□□□ 0.68
CPNE1-219ENST00000440240 PDE9AO76083 593 aa19.27■□□□□ 0.68
CPNE1-219ENST00000440240 TNNI3P19429 210 aa19.27■□□□□ 0.68
CPNE1-219ENST00000440240 SSTR1P30872 391 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms