RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MYADML2A6NDP7 307 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 MYL12BO14950 172 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-204ENST00000438964 RHOCP08134 193 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ANXA5P08758 320 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 DDCP20711 480 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 DGKAP23743 735 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 RPS5P46782 204 aaKnown RBP12.81□□□□□ -0.36
ACTN1-204ENST00000438964 OR1G1P47890 313 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 CACNG1Q06432 222 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 SNTA1Q13424 505 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ATP13A5Q4VNC0 1218 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ANKRD54Q6NXT1 300 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 MTFR2Q6P444 385 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ANKS3Q6ZW76 656 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 BMPERQ8N8U9 685 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 DENND6BQ8NEG7 585 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ANGPTL6Q8NI99 470 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 WBP2Q969T9 261 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 SLC6A18Q96N87 628 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 SAMD11Q96NU1 681 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 NTMT1Q9BV86 223 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 DPCDQ9BVM2 203 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-204ENST00000438964 ACAT2Q9BWD1 397 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 TMEM161AQ9NX61 479 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 TRPS1Q9UHF7 1281 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 PCDHB11Q9Y5F2 797 aa12.81□□□□□ -0.36
ACTN1-204ENST00000438964 C2orf92A0A1B0GVN3 265 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ZNF670-ZNF695F2Z2N8 137 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TLR4O00206 839 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 AKAP8O43823 692 aaKnown RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ALPPP05187 535 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ARSBP15848 533 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CD22P20273 847 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 PKLRP30613 574 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CSNK1DP48730 415 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SLC9A3P48764 834 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 AGFG1P52594 562 aaKnown RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 BCL2L15Q5TBC7 163 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 LCN1P1Q5VSP4 162 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CCSAPQ6IQ19 270 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TMEM145Q8NBT3 493 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TSSK6Q9BXA6 273 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TBC1D17Q9HA65 648 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ACER3Q9NUN7 267 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 GAPDHSO14556 408 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 OR10H3O60404 316 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 C6orf47O95873 294 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ETV5P41161 510 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ETV1P50549 477 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CLCN4P51793 760 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 HBA1P69905 142 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ACSM2AQ08AH3 577 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 RBBP4Q09028 425 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 FCN2Q15485 313 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ZNF385BQ569K4 471 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 FRG2Q64ET8 278 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ACSM2BQ68CK6 577 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 BRAT1Q6PJG6 821 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SERPINA13PQ6UXR4 307 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 GPR142Q7Z601 462 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 RIT1Q92963 219 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 FRG2BQ96QU4 278 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■■□□□ 14.2
ACTN1-204ENST00000438964 TMEM45AQ9NWC5 275 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ING3Q9NXR8 418 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 STUB1Q9UNE7 303 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 B8ZZF3 427 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 MRPS14O60783 128 aaKnown RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 PDGFAP04085 211 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 HRGP04196 525 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 FCER2P06734 321 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 PRPS2P11908 318 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CRISP1P54107 249 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SRP54P61011 504 aaKnown RBP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ZNF91Q05481 1191 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TARDBPQ13148 414 aaKnown RBP eCLIP12.8□□□□□ -0.36
ACTN1-204ENST00000438964 NFATC2Q13469 925 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SEC23BQ15437 767 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 IFI44LQ53G44 452 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CPTPQ5TA50 214 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 C16orf62Q7Z3J2 963 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 C11orf65Q8NCR3 313 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 TESCQ96BS2 214 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 ART5Q96L15 291 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 HDHD2Q9H0R4 259 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SLC32A1Q9H598 525 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 MGAT4AQ9UM21 535 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 SCML2Q9UQR0 700 aa12.8□□□□□ -0.36
ACTN1-204ENST00000438964 M0QZ92 97 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 CASKO14936 926 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms