RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 BMP7P18075 431 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 EIF4EBP2Q13542 120 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 GANABQ14697 944 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZSWIM7Q19AV6 140 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PTCHD4Q6ZW05 846 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 RETREG3Q86VR2 466 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF860A6NHJ4 632 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 TARM1B6A8C7 271 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 MYL12BO14950 172 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 KHKP50053 298 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 RNASE12Q5GAN4 147 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 NHSL2Q5HYW2 709 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZSWIM9Q86XI8 627 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 KCT2Q8NC54 265 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 C19orf18Q8NEA5 215 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 HSH2DQ96JZ2 352 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CAMK1GQ96NX5 476 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 DPH2Q9BQC3 489 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRDM8Q9NQV8 689 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 CALML5Q9NZT1 146 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 MARK1Q9P0L2 795 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 PCDHB14Q9Y5E9 798 aa11.09□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR6C74A6NCV1 312 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 C8BP07358 591 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ELK4P28324 431 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 KDELR2P33947 212 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 RYKP34925 604 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 WSCD2Q2TBF2 565 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 UAP1L1Q3KQV9 507 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 FAM180BQ6P0A1 224 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF765Q7L2R6 523 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ALG14Q96F25 216 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TUBB1Q9H4B7 451 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SMURF2Q9HAU4 748 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 OBP2AQ9NY56 170 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 MAT2BQ9NZL9 334 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMCC2O75069 709 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 PMS2P3Q13401 168 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 HENMT1Q5T8I9 393 aaKnown RBP11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ABHD13Q7L211 337 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 C12orf40Q86WS4 652 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 CCDC116Q8IYX3 515 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM125Q96AQ2 219 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 MAELQ96JY0 434 aaKnown RBP11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 NODALQ96S42 347 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM181Q9P2C4 612 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 P2RX2Q9UBL9 471 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TRBC2A0A5B9 178 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 CAPNS1P04632 268 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF630Q2M218 657 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM31Q5JXX7 168 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SNX29P2Q8IUI4 249 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 EPHX4Q8IUS5 362 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR52L1Q8NGH7 329 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 HCAR2Q8TDS4 363 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 GPR151Q8TDV0 419 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC38A4Q969I6 547 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC38A2Q96QD8 506 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF347Q96SE7 839 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 INPP5KQ9BT40 448 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLAMF8Q9P0V8 285 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 ACSL6Q9UKU0 697 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
TRAPPC9-202ENST00000438773 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 GTPBP1O00178 669 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ARHGEF15O94989 841 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CCNB2O95067 398 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SNAP29O95721 258 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 AK4P27144 223 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 IMPA1P29218 277 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 DNAJA1P31689 397 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PXNP49023 591 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ABATP80404 500 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 MEP1AQ16819 746 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 DEFB134Q4QY38 66 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CYBRD1Q53TN4 286 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 IRAK1BP1Q5VVH5 260 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 LCN8Q6JVE9 175 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 GALNT10Q86SR1 603 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 AMER2Q8N7J2 671 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 COX18Q8N8Q8 333 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR2T11Q8NH01 316 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TEX47Q8TBZ9 253 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 Q96MT0 163 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CCNB1IP1Q9NPC3 277 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 FAIMQ9NVQ4 179 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 MALT1Q9UDY8 824 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SATB2Q9UPW6 733 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM202A6NGA9 273 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CLDN25C9JDP6 229 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 H0YC42 278 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 B4GAT1O43505 415 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms