RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TBC1D3IA0A087WXS9 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3EA0A087X179 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3KA0A087X1G2 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PIPSLA2A3N6 862 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3FA6NER0 549 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 A6NL46 340 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3LB9A6J9 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC1A7O00341 560 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 MBTPS2O43462 519 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 NDUFS2O75306 463 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3HP0C7X1 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TRIM23P36406 574 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 DAPP51397 102 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 CRYBA2P53672 197 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 MRPS21P82921 87 aaKnown RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC85BQ15834 202 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3GQ6DHY5 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3CQ6IPX1 549 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF852Q6ZMS4 543 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 COMMD6Q7Z4G1 85 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D3Q8IZP1 549 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 MFSD4AQ8N468 514 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 VPS37AQ8NEZ2 397 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC17A9Q9BYT1 436 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PDP1Q9P0J1 537 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SCHIP1Q9P0W5 487 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SPATA7Q9P0W8 599 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PNMA8BQ9ULN7 279 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 DYRK1BQ9Y463 629 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM265A0A087WTH1 108 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 C1orf226A1L170 272 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PCSK2P16519 638 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 MAGP20916 626 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 CD72P21854 359 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ACADLP28330 430 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 EPHA2P29317 976 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ARHGDIAP52565 204 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 NCS1P62166 190 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TAP2Q03519 686 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SMAD4Q13485 552 aaKnown RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 RGNQ15493 299 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 FAM180BQ6P0A1 224 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 NAGSQ8N159 534 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 SYNPOQ8N3V7 929 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 FBXO15Q8NCQ5 510 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 RPL3LQ92901 407 aaKnown RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 CIDECQ96AQ7 238 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 NODALQ96S42 347 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 ZDHHC5Q9C0B5 715 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 MIR1-1HGQ9H1L0 117 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 TM9SF3Q9HD45 589 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 CD93Q9NPY3 652 aa13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 PHPT1Q9NRX4 125 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3-201ENST00000438700 OPN1SWP03999 348 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 FMO3P31513 532 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 CRATP43155 626 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 C21orf58P58505 322 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 PPP2CBP62714 309 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 PPP2CAP67775 309 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 HBA1P69905 142 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF763Q0D2J5 394 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 COX20Q5RI15 118 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 KIAA1324Q6UXG2 1013 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 EIF3MQ7L2H7 374 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 OR9A1PQ8NGU1 263 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 FAR1Q8WVX9 515 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 HTRA1Q92743 480 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 MRGPRX1Q96LB2 322 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 GAS2L1Q99501 681 aaPredicted RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 ASPSCR1Q9BZE9 553 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 UBE2ZQ9H832 354 aaPredicted RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 KIF17Q9P2E2 1029 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 ACSL6Q9UKU0 697 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 CFAP20Q9Y6A4 193 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 SEMG1P04279 462 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 TCEA1P23193 301 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 TEAD1P28347 426 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 CD6P30203 668 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 IGFALSP35858 605 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 HNRNPFP52597 415 aaKnown RBP13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 RFX4Q33E94 735 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 DEPDC1Q5TB30 811 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 AGAP7PQ5VUJ5 663 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC81Q6ZN84 652 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 PDZD3Q86UT5 571 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 OXR1Q8N573 874 aa13.26□□□□□ -0.29
PTCHD3-201ENST00000438700 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms