RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PRSS33Q8NF86 280 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 OR8H1Q8NGG4 311 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 OR10G7Q8NGN6 311 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 OR13C5Q8NGS8 318 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 SPATA18Q8TC71 538 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 BPIFA2Q96DR5 249 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF560Q96MR9 790 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 AGAP4Q96P64 663 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 TMEM237Q96Q45 408 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 LGMNQ99538 433 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 LRRC2Q9BYS8 371 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 MAGEF1Q9HAY2 307 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 GPN1Q9HCN4 374 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 NUDT4Q9NZJ9 180 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 DBF4Q9UBU7 674 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 PSORS1C1Q9UIG5 152 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 APPL1Q9UKG1 709 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 ETV7Q9Y603 341 aa3.08□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 GLTPD2A6NH11 291 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 SLC15A5A6NIM6 579 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 NPIPB9F8W1W9 429 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 SOCS3O14543 225 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 PSMD3O43242 534 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 HSF2BPO75031 334 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ATP6V1G1O75348 118 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 CLN5O75503 358 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 SKILP12757 684 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 B4GALT1P15291 398 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 GPR183P32249 361 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ELAVL2Q12926 359 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF177Q13360 481 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 PDE7AQ13946 482 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 CEACAM7Q14002 265 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 C3P1Q6ZMU1 363 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZFAND4Q86XD8 727 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 TEX26Q8N6G2 289 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 RTL3Q8N8U3 475 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 RNF149Q8NC42 400 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 HAS2Q92819 552 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF274Q96GC6 653 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 PRICKLE1Q96MT3 831 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 PKP2Q99959 881 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 VGLL1Q99990 258 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 LRRC61Q9BV99 259 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ABCG8Q9H221 673 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 NLGN3Q9NZ94 848 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 ODF2LQ9ULJ1 636 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 EXOC7Q9UPT5 735 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 FOXA2Q9Y261 457 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 TEX264Q9Y6I9 313 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 CACNA1FO60840 1977 aa3.07□□□□□ -1.92
TRAPPC13-204ENST00000438419 E9PQ18 207 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TLR4O00206 839 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 RNF103O00237 685 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 B4GAT1O43505 415 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 SYT7O43581 403 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 HTATSF1O43719 755 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 LRCH4O75427 683 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 MTRF1O75570 445 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 SORBS2O94875 1100 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TBX6O95947 436 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ABHD2P08910 425 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 GSTA2P09210 222 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ODC1P11926 461 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 GIFP27352 417 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 CASP9P55211 416 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 KCNK10P57789 538 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 CNTN1Q12860 1018 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 KRT31Q15323 416 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 FAM189A2Q15884 450 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 PKN2Q16513 984 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 LYPLAL1Q5VWZ2 237 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF776Q68DI1 518 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TCEAL6Q6IPX3 200 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TATDN1Q6P1N9 297 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 CNSTQ6PJW8 725 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TMEM64Q6YI46 380 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 GDPGP1Q6ZNW5 385 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZSCAN30Q86W11 494 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 STHQ8IWL8 128 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ZNF444Q8N0Y2 327 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 Q8NBF4 154 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 AQP11Q8NBQ7 271 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TRPV3Q8NET8 790 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 OR4A16Q8NH70 328 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 RPLP0P6Q8NHW5 317 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 URGCPQ8TCY9 931 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 SMPDL3AQ92484 453 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 SLC35C1Q96A29 364 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 CNRIP1Q96F85 164 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 DTD2Q96FN9 168 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 EEF2KMTQ96G04 330 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ATXN7L3BQ96GX2 97 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 RUFY1Q96T51 708 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 PCDHB18PQ96TA0 734 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 FAM213AQ9BRX8 229 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 NTMT1Q9BV86 223 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 TSPYL1Q9H0U9 437 aa3.06□□□□□ -1.92
TRAPPC13-204ENST00000438419 ABCG4Q9H172 646 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms