RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MFSD4BQ5TF39 518 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 COMMD6Q7Z4G1 85 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 HDDC2Q7Z4H3 204 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TRIM46Q7Z4K8 759 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 IQCHQ86VS3 1027 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RANBP3LQ86VV4 465 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 FAM98AQ8NCA5 519 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TTLQ8NG68 377 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR9Q2Q8NGE9 314 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 WFIKKN2Q8TEU8 576 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 C12orf66Q96MD2 445 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 MROQ9BYG7 248 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SMG9Q9H0W8 520 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR51E2Q9H255 320 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 MCUBQ9NWR8 336 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SBF2Q86WG5 1849 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TRIP11Q15643 1979 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TCRBV5S2A0A599 114 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 NUAK1O60285 661 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 MMP20O60882 483 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 NOS1APO75052 506 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CH25HO95992 272 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ADAP00813 363 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CDK1P06493 297 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 BMP4P12644 408 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CMPK1P30085 196 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CD70P32970 193 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 MPIP34949 423 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 HOXD12P35452 270 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DAPP51397 102 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ATP12AP54707 1039 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SKP1P63208 163 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 VLDLRP98155 873 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DSC1Q08554 894 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LASP1Q14847 261 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LY6G5CQ5SRR4 150 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 FAM220AQ7Z4H9 259 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DCUN1D3Q8IWE4 304 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ING5Q8WYH8 240 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DNASE1L2Q92874 299 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 RERGQ96A58 199 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 C1QTNF3Q9BXJ4 246 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SLC7A5P2Q9GIP4 190 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 OR2B2Q9GZK3 357 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DIABLOQ9NR28 239 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TDP1Q9NUW8 608 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 WDR70Q9NW82 654 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 STOX2Q9P2F5 926 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TNFRSF10DQ9UBN6 386 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LHX3Q9UBR4 397 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 UTS2RQ9UKP6 389 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DUXAA6NLW8 204 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 KHDRBS3O75525 346 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SRCP12931 536 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CA5AP35218 305 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ISL1P61371 349 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 STXBP1P61764 594 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 PPP2R2BQ00005 443 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ST3GAL3Q11203 375 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ATAT1Q5SQI0 421 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 DESI1Q6ICB0 168 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ADNP2Q6IQ32 1131 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LIMS2Q7Z4I7 341 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SIX5Q8N196 739 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 FIBINQ8TAL6 211 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 NUDT8Q8WV74 236 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TMED9Q9BVK6 235 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TRMT61BQ9BVS5 477 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 KLF16Q9BXK1 252 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 AMBRA1Q9C0C7 1298 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 BTBD1Q9H0C5 482 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 RNF38Q9H0F5 515 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ANKMY1Q9P2S6 941 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 IFT52Q9Y366 437 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CFAP20Q9Y6A4 193 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 AP1M2Q9Y6Q5 423 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 GSAPA4D1B5 854 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ERI3O43414 337 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CLCNKAP51800 687 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 MAB21L1Q13394 359 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SLC36A4Q6YBV0 504 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ASB18Q6ZVZ8 466 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LRRTM4Q86VH4 590 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SAMD14Q8IZD0 417 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 MEIOBQ8N635 442 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 OR4C6Q8NH72 309 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 LKAAEAR1Q8TD35 194 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 C17orf50Q8WW18 174 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 METTL2AQ96IZ6 378 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 ZFP3Q96NJ6 502 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TBX5Q99593 518 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 P2RY13Q9BPV8 354 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM246Q9BRR3 403 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 BRF2Q9HAW0 419 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms