RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OR9A4Q8NGU2 314 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 RCN3Q96D15 328 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 MAPKAP1Q9BPZ7 522 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 NDC1Q9BTX1 674 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 MIEF1Q9NQG6 463 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 MS4A12Q9NXJ0 267 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 RARRES3Q9UL19 164 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 ATG4BQ9Y4P1 393 aa21.78■■□□□ 1.08
CPSF4-204ENST00000436336 TMX2-CTNND1H3BSU7 103 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 TBX19O60806 448 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 PIM1P11309 404 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 KIR3DL1P43629 444 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 AVPR1BP47901 424 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 LIM2P55344 173 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 RUNX2Q13950 521 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 PGS1Q32NB8 556 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 CPTPQ5TA50 214 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 REP15Q6BDI9 236 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 EFCAB3Q8N7B9 438 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 COQ8BQ96D53 544 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 MVB12AQ96EY5 273 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 ZNF764Q96H86 408 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 CLK4Q9HAZ1 481 aaKnown RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 OCIAD1Q9NX40 245 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 KCMF1Q9P0J7 381 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 LEF1Q9UJU2 399 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 A0A0A6YYC8 382 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 A0A1W2PR48 441 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 C1orf226A1L170 272 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 ZNF860A6NHJ4 632 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 B2RBV5 119 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 I3L1I5 382 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 SGK494L7N484 410 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 AIM2O14862 343 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 PROM1O43490 865 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 DDX5P17844 614 aaKnown RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 TLR1Q15399 786 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 MSANTD1Q6ZTZ1 278 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 PPCDCQ96CD2 204 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 SLC7A6OSQ96CW6 309 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 OR52E6Q96RD3 313 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 NPAS2Q99743 824 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 ATAD3AQ9NVI7 634 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 AKAP7Q9P0M2 348 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-204ENST00000436336 SH3BP4Q9P0V3 963 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 PCDHA9Q9Y5H5 950 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 SPACA6W5XKT8 324 aa21.77■■□□□ 1.08
CPSF4-204ENST00000436336 SCN2AQ99250 2005 aa21.77■■□□□ 1.07
CPSF4-204ENST00000436336 ASPDHA6ND91 283 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 EFCAB7A8K855 629 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 H0YIG0 161 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 ZNF749O43361 778 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 CSRP1P21291 193 aaKnown RBP21.76■■□□□ 1.07
CPSF4-204ENST00000436336 BUD31P41223 144 aaPredicted RBP21.76■■□□□ 1.07
CPSF4-204ENST00000436336 NCALDP61601 193 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 OLR1P78380 273 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 MXRA7P84157 204 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 IL11RAQ14626 422 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 ANKRD26P1Q6NSI1 321 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 TICAM1Q8IUC6 712 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 CA13Q8N1Q1 262 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 PCYOX1LQ8NBM8 494 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 NETO1Q8TDF5 533 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 DUSP26Q9BV47 211 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 BHLHE41Q9C0J9 482 aaPredicted RBP21.76■■□□□ 1.07
CPSF4-204ENST00000436336 STRADBQ9C0K7 418 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 C1orf21Q9H246 121 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 EHD3Q9NZN3 535 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 SRPK3Q9UPE1 567 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 KIF26BQ2KJY2 2108 aa21.76■■□□□ 1.07
CPSF4-204ENST00000436336 AGRPO00253 132 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 MRASO14807 208 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 RDH16O75452 317 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 AIFM1O95831 613 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 LAMP1P11279 417 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 CPN2P22792 545 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 PTPN4P29074 926 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 ALDH9A1P49189 494 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 NUDT2P50583 147 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 PHC1P78364 1004 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 TNFRSF17Q02223 184 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 OR4F3Q6IEY1 312 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 RINLQ6ZS11 566 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 TTLL10Q6ZVT0 673 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 RETREG3Q86VR2 466 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 PPP1R3BQ86XI6 285 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 MMP21Q8N119 569 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 BMPERQ8N8U9 685 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 CMKLR1Q99788 373 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.75■■□□□ 1.07
CPSF4-204ENST00000436336 FAM120CQ9NX05 1096 aaKnown RBP21.75■■□□□ 1.07
CPSF4-204ENST00000436336 DSCR3O14972 297 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 HYAL3O43820 417 aaPredicted RBP21.75■■□□□ 1.07
CPSF4-204ENST00000436336 DNAJB6O75190 326 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 FGF5P12034 268 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 COL9A2Q14055 689 aaPredicted RBP21.75■■□□□ 1.07
CPSF4-204ENST00000436336 MAPKAPK3Q16644 382 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 ISXQ2M1V0 245 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 ZNF385BQ569K4 471 aa21.75■■□□□ 1.07
CPSF4-204ENST00000436336 C18orf63Q68DL7 685 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms