RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 A0A1W2PRV1 198 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 I3L1I5 382 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 PSMA7O14818 248 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 KINO60870 393 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 KERAO60938 352 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 GSRP00390 522 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 ZFYP08048 801 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 ADORA3P0DMS8 318 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 P4HA1P13674 534 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 F3P13726 295 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 DUTP33316 252 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 PCGF2P35227 344 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 UBASH3AP57075 661 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 BPIFB3P59826 476 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 PTENP60484 403 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 SCN1BQ07699 218 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 PPA1Q15181 289 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 TMEM44Q2T9K0 475 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 DNAJC21Q5F1R6 531 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 FGD3Q5JSP0 725 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 RAB12Q6IQ22 244 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 ISLR2Q6UXK2 745 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 SPATA21Q7Z572 469 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 MFN1Q8IWA4 741 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 CCDC60Q8IWA6 550 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 PRR22Q8IZ63 422 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 NHLRC2Q8NBF2 726 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 NEK11Q8NG66 645 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 ST7LQ8TDW4 575 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 HEXDCQ8WVB3 486 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 ESAMQ96AP7 390 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 NXPE2Q96DL1 559 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 LURAP1Q96LR2 239 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 CFAP57Q96MR6 1250 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 MUS81Q96NY9 551 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 SLC25A23Q9BV35 468 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 GTPBP2Q9BX10 602 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 FUT8Q9BYC5 575 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 SLC5A7Q9GZV3 580 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 POLLQ9UGP5 575 aa2.52□□□□□ -2.01
PTPN4-205ENST00000433888 CPSF3Q9UKF6 684 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 CFAP65Q6ZU64 1925 aaKnown RBP2.52□□□□□ -2.01
PTPN4-205ENST00000433888 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SALL1Q9NSC2 1324 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 ARID1AO14497 2285 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 A0A1B0GTH9 108 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 NKX6-3A6NJ46 265 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 C19orf81C9J6K1 198 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SELENOFO60613 162 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 PSMB4P28070 264 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SMU1Q2TAY7 513 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SLC39A12Q504Y0 691 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SPANXN4Q5MJ08 99 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 FAM91A1Q658Y4 838 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD33Q7Z3H0 272 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 TLK2Q86UE8 772 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 OR5M9Q8NGP3 310 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 EXT2Q93063 718 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 TBC1D31Q96DN5 1066 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 CDHR1Q96JP9 859 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 AK8Q96MA6 479 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SPATA13Q96N96 652 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 UTP14AQ9BVJ6 771 aaKnown RBP2.51□□□□□ -2.01
PTPN4-205ENST00000433888 PAPOLGQ9BWT3 736 aaKnown RBP2.51□□□□□ -2.01
PTPN4-205ENST00000433888 THAP9Q9H5L6 903 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 MINDY3Q9H8M7 445 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 CNIH4Q9P003 139 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 SPATA2Q9UM82 520 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 AUP1Q9Y679 476 aa2.51□□□□□ -2.01
PTPN4-205ENST00000433888 ANXA2P2A6NMY6 339 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 DDX39AO00148 427 aaKnown RBP2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF263O14978 683 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 AP5Z1O43299 807 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 RPS6KA5O75582 802 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 OR6B1O95007 311 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 IGHG1P01857 330 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 POLR2FP61218 127 aaKnown RBP2.5□□□□□ -2.01
PTPN4-205ENST00000433888 PTPRCAPQ14761 206 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 LTB4RQ15722 352 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 MEP1BQ16820 701 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 HFEQ30201 348 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 POM121L1PQ3SYA9 428 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 TIMM50Q3ZCQ8 353 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 TTC31Q49AM3 519 aaPredicted RBP2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD20A4Q4UJ75 823 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD20A8PQ5CZ79 823 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 GLRA4Q5JXX5 417 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD20A2Q5SQ80 823 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD20A1Q5TYW2 823 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ANKRD20A3Q5VUR7 823 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 PODNL1Q6PEZ8 512 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 KCTD9Q7L273 389 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 LRRC49Q8IUZ0 686 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 UNC45BQ8IWX7 931 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 RYBPQ8N488 228 aaPredicted RBP2.5□□□□□ -2.01
PTPN4-205ENST00000433888 OR8H1Q8NGG4 311 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 FAM162AQ96A26 154 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 RMDN2Q96LZ7 410 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 RANBP9Q96S59 729 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 STRADBQ9C0K7 418 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms