RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 GPR143P51810 404 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 SMSP52788 366 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 MTTPP55157 894 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 GPR85P60893 370 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ATP6V0D1P61421 351 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ILF2Q12905 390 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ZKSCAN8Q15776 578 aaPredicted RBP20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ABHD17CQ6PCB6 329 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 MDGA2Q7Z553 956 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 CTAGE3PQ8IX95 158 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ZNF595Q8IYB9 648 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 PDPRQ8NCN5 879 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 SEC16BQ96JE7 1060 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 F2RL3Q96RI0 385 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 RUBCNLQ9H714 662 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 LIN28AQ9H9Z2 209 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 CHST11Q9NPF2 352 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 ADAP2Q9NPF8 381 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 RNF112Q9ULX5 631 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 DAPP1Q9UN19 280 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 PPIEQ9UNP9 301 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 MRPS33Q9Y291 106 aaKnown RBP20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 CACNA1CQ13936 2221 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 PKDREJQ9NTG1 2253 aa20.32■□□□□ 0.84
RPUSD3-206ENST00000433535 C19orf84I3L1E1 186 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 CYR61O00622 381 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 EIF3HO15372 352 aaKnown RBP eCLIP20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 PEX1O43933 1283 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 FAM155BO75949 473 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 COX6B1P14854 86 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 GPX6P59796 221 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 RAB10P61026 200 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 CDKL4Q5MAI5 379 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 C3orf62Q6ZUJ4 267 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 ZNF572Q7Z3I7 529 aaPredicted RBP20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 DOLPP1Q86YN1 238 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 TRIM44Q96DX7 344 aaPredicted RBP20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 WDR34Q96EX3 536 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 EFCAB11Q9BUY7 163 aa20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 PTBP2Q9UKA9 531 aaKnown RBP20.31■□□□□ 0.84
RPUSD3-206ENST00000433535 CSMD1Q96PZ7 3565 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 HS6ST1O60243 411 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 S100BP04271 92 aaPredicted RBP20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 IFNA16P05015 189 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 TFEBP19484 476 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 AGAP20933 346 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 HPDP32754 393 aaPredicted RBP20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 KCNC1P48547 511 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 SSR4P51571 173 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 CHIT1Q13231 466 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 SLMAPQ14BN4 828 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 ELAVL1Q15717 326 aaKnown RBP20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 GDF7Q7Z4P5 450 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 CMC1Q7Z7K0 106 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 POGLUT1Q8NBL1 392 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 KIAA1191Q96A73 305 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 UBXN10Q96LJ8 280 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 CCDC77Q9BR77 488 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 ALG9Q9H6U8 611 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 PRDM7Q9NQW5 492 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 KCMF1Q9P0J7 381 aa20.3■□□□□ 0.84
RPUSD3-206ENST00000433535 KLRC4-KLRK1H3BQV0 150 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 CDC40O60508 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 SH3BGRLO75368 114 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 OR2J2O76002 312 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 CLDN14O95500 239 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 PTGER4P35408 488 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 MSH2P43246 934 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 IRF8Q02556 426 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 DLG1Q12959 904 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 EFTUD2Q15029 972 aaKnown RBP eCLIP20.29■□□□□ 0.842e-6■■■□□ 17.1
RPUSD3-206ENST00000433535 KBTBD12Q3ZCT8 623 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 ZNF793Q6ZN11 406 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 LRRC70Q7Z2Q7 622 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 UBE3DQ7Z6J8 389 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 CCDC25Q86WR0 208 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 PPM1NQ8N819 430 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 PRM3Q9NNZ6 103 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 ERVK-11Q9UQG0 969 aa20.29■□□□□ 0.84
RPUSD3-206ENST00000433535 APCP25054 2843 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 A0A1B0GTH9 108 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 TMEM200CA6NKL6 621 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 SUPT3HB4E1H0 165 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 RTCAO00442 366 aaKnown RBP20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 PRRG2O14669 202 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 ADAM10O14672 748 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 LDB3O75112 727 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 SUPT3HO75486 399 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 ZFAND5O76080 213 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 SLC35E2BP0CK96 405 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 PLTPP55058 493 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 ID2Q02363 134 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 TGM3Q08188 693 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 BMPR2Q13873 1038 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 CMPK2Q5EBM0 449 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 PAGE2BQ5JRK9 111 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 RAPH1Q70E73 1250 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 MAATS1Q7Z4T9 603 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 CD163Q86VB7 1156 aa20.28■□□□□ 0.84
RPUSD3-206ENST00000433535 ZNF321PQ8N8H1 164 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms