RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GSTM5P46439 218 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RHAGQ02094 409 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 CHIT1Q13231 466 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ATXN7L2Q5T6C5 722 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 FRG2Q64ET8 278 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TIGD3Q6B0B8 471 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 UBE2R2Q712K3 238 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 IQCF1Q8N6M8 205 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TMEM145Q8NBT3 493 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF680Q8NEM1 530 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 GPRC5AQ8NFJ5 357 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 GATAD2BQ8WXI9 593 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 HIST1H2AHQ96KK5 128 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 FRG2BQ96QU4 278 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 HIST1H2AJQ99878 128 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 H2AFJQ9BTM1 129 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TM6SF2Q9BZW4 377 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 PAK6Q9NQU5 681 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ING4Q9UNL4 249 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RWDD3Q9Y3V2 267 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 GABRR3A8MPY1 467 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TMEM229AB2RXF0 380 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TLX2O43763 284 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 OR10H3O60404 316 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 SCN2BO60939 215 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RFPL3O75679 317 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 CTBP2P56545 445 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RPA4Q13156 261 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 FCN2Q15485 313 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 COMMD7Q86VX2 200 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 RBFAQ8N0V3 343 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ACER3Q9NUN7 267 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 TEX51A0A1B0GUA7 166 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SLC35F4A4IF30 521 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 DRGXA6NNA5 263 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SERPINI2O75830 405 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 RPS25P62851 125 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SNTA1Q13424 505 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SCARB2Q14108 478 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 BCL2L15Q5TBC7 163 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 FAM180BQ6P0A1 224 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 B3GLCTQ6Y288 498 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PGBD3Q8N328 593 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 C9orf62Q8N4C0 152 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 LRRC17Q8N6Y2 441 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 HJURPQ8NCD3 748 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 TOR1AIP2Q8NFQ8 470 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 CSGALNACT1Q8TDX6 532 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MAPKAP1Q9BPZ7 522 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MED28Q9H204 178 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 B3GAT2Q9NPZ5 323 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 IL17CQ9P0M4 197 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 C17orf102A2RUQ5 167 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MGAT4DA6NG13 374 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 TPST2O60704 377 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 RHOCP08134 193 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PRKACAP17612 351 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MAPKAPK2P49137 400 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PSEN2P49810 448 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SRP54P61011 504 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 IRF8Q02556 426 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF91Q05481 1191 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ABRQ12979 859 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 TSTA3Q13630 321 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 GDPGP1Q6ZNW5 385 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SHFQ7M4L6 423 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 OR4C15Q8NGM1 316 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PKMYT1Q99640 499 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 KATNB1Q9BVA0 655 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 FBXO44Q9H4M3 255 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 C12orf10Q9HB07 376 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 U3KQ87 197 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 E9PQ18 207 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 MPZL2O60487 215 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SLC6A4P31645 630 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SOAT1P35610 550 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PER3P56645 1201 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 RAB8AP61006 207 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ABATP80404 500 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 DBPQ10586 325 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ADNP2Q6IQ32 1131 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 SEPT5Q99719 369 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 PIP5K1AQ99755 562 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 TBC1D17Q9HA65 648 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 FAM120CQ9NX05 1096 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 EIF3KQ9UBQ5 218 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-202ENST00000433297 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
HMGCS1-202ENST00000433297 RFXAPO00287 272 aa11.04□□□□□ -0.64
HMGCS1-202ENST00000433297 NUPL2O15504 423 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-202ENST00000433297 F2P00734 622 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms