RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 SPNP16150 400 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 ST8SIA6P61647 398 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 OLR1P78380 273 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
SMPD4-206ENST00000433118 ZNF385BQ569K4 471 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 RAVER1Q8IY67 606 aaKnown RBP10.09□□□□□ -0.79
SMPD4-206ENST00000433118 DENND6BQ8NEG7 585 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 B3GNT7Q8NFL0 401 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 IFT52Q9Y366 437 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 UGT2A1Q9Y4X1 527 aa10.09□□□□□ -0.79
SMPD4-206ENST00000433118 RNASET2O00584 256 aaKnown RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PCDH17O14917 1159 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 TSPAN6O43657 245 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PTTG1O95997 202 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 TIMP2P16035 220 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 ITGA2P17301 1181 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 SOX6P35712 828 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CHI3L1P36222 383 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 DGKEP52429 567 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 POLR2LP62875 67 aaKnown RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 TP53BP2Q13625 1128 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CLIP4Q8N3C7 705 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 TXNDC15Q96J42 360 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 GPATCH2Q9NW75 528 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 FKBP14Q9NWM8 211 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CCDC59Q9P031 241 aaKnown RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 IL36AQ9UHA7 158 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 MAPRE3Q9UPY8 281 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PEX16Q9Y5Y5 336 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 AP1M2Q9Y6Q5 423 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 A3GALT2U3KPV4 340 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CCDC88CQ9P219 2028 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 NINQ8N4C6 2090 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 HEPACAM2A8MVW5 462 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 LINC01565O15544 149 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 SLCO2B1O94956 709 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PTX3P26022 381 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 POU1F1P28069 291 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 SOAT1P35610 550 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 NKX2-5P52952 324 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 UGT2B15P54855 530 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CDC42P60953 191 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 UBE3AQ05086 875 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PRKCDQ05655 676 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 NUMA1Q14980 2115 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 METTL4Q8N3J2 472 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 LMNTD1Q8N9Z9 388 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CHTF18Q8WVB6 975 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 NEIL2Q969S2 332 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 EFHD2Q96C19 240 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 COQ8BQ96D53 544 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 METTL2AQ96IZ6 378 aaKnown RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 CPEB1Q9BZB8 566 aaKnown RBP10.08□□□□□ -0.8
SMPD4-206ENST00000433118 NUAK2Q9H093 628 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 QPCTLQ9NXS2 382 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 RHCGQ9UBD6 479 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 SLC6A14Q9UN76 642 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 PCM1Q15154 2024 aa10.08□□□□□ -0.8
SMPD4-206ENST00000433118 TBC1D3BA6NDS4 549 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 KIAA0513O60268 411 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 PSIP1O75475 530 aaKnown RBP10.07□□□□□ -0.8
SMPD4-206ENST00000433118 FGF19O95750 216 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 IMPA1P29218 277 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 PXNP49023 591 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-206ENST00000433118 DEFA1P59665 94 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 DEFA3P59666 94 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 MC1RQ01726 317 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 ZNF763Q0D2J5 394 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TSTQ16762 297 aaKnown RBP10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TANGO2Q6ICL3 276 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 CAMKMTQ7Z624 323 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 RNF130Q86XS8 419 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TAGAPQ8N103 731 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 OR4C15Q8NGM1 316 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 CEP19Q96LK0 163 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 OR5M11Q96RB7 305 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 KCNS3Q9BQ31 491 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TMEM121BQ9BXQ6 578 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-206ENST00000433118 NKX2-4Q9H2Z4 354 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 REEP4Q9H6H4 257 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 PCDHGB6Q9Y5F9 930 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 KCNE2Q9Y6J6 123 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 SPEGQ15772 3267 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 PRAMEF25A6NGN4 478 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 FADS2P1A8MWK0 482 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 PSMD11O00231 422 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 HAT1O14929 419 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 SGTAO43765 313 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 TNFRSF21O75509 655 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 GADD45GO95257 159 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 MVDP53602 400 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 CDK6Q00534 326 aa10.07□□□□□ -0.8
SMPD4-206ENST00000433118 EIF4HQ15056 248 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms