RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
PDE6D-203ENST00000428104 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
PDE6D-203ENST00000428104 PRDM14Q9GZV8 571 aa13.18□□□□□ -0.3
PDE6D-203ENST00000428104 BOKQ9UMX3 212 aaPredicted RBP13.18□□□□□ -0.3
PDE6D-203ENST00000428104 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
PDE6D-203ENST00000428104 SNPHO15079 494 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 PSMD3O43242 534 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 OR1F1O43749 312 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 SERPINC1P01008 464 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 GRK3P35626 688 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 CPOXP36551 454 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 MC3RP41968 323 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
PDE6D-203ENST00000428104 PWP1Q13610 501 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 P3H1Q32P28 736 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 OPN5Q6U736 354 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 SCUBE1Q8IWY4 988 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 CA13Q8N1Q1 262 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 OTUD6BQ8N6M0 293 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 UTP15Q8TED0 518 aaKnown RBP13.17□□□□□ -0.3
PDE6D-203ENST00000428104 ASB11Q8WXH4 323 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 ZBED6CLQ96FA7 236 aaPredicted RBP13.17□□□□□ -0.3
PDE6D-203ENST00000428104 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 MMACHCQ9Y4U1 282 aa13.17□□□□□ -0.3
PDE6D-203ENST00000428104 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 C4orf51C9J302 202 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 AKR1B10O60218 316 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 LRATO95237 230 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 CRYGSP22914 178 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 GDF1P27539 372 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
PDE6D-203ENST00000428104 HNRNPFP52597 415 aaKnown RBP13.16□□□□□ -0.3
PDE6D-203ENST00000428104 GDF10P55107 478 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 RGS1Q08116 209 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDE6D-203ENST00000428104 DCST1Q5T197 706 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 SLC22A10Q63ZE4 541 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 NIPAL1Q6NVV3 410 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 ZNF441Q8N8Z8 693 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 ALKBH8Q96BT7 664 aaKnown RBP13.16□□□□□ -0.3
PDE6D-203ENST00000428104 NTNG2Q96CW9 530 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 SFXN3Q9BWM7 321 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 OSBPL8Q9BZF1 889 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 CXorf56Q9H5V9 222 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 PROK2Q9HC23 129 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 CHRAC1Q9NRG0 131 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 QPCTLQ9NXS2 382 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 SLC6A5Q9Y345 797 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 DSCAMO60469 2012 aa13.16□□□□□ -0.3
PDE6D-203ENST00000428104 ROS1P08922 2347 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 EML6Q6ZMW3 1958 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 GFYI3L273 518 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 SOX18P35713 384 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 RNF4P78317 190 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CUL1Q13616 776 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
PDE6D-203ENST00000428104 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 SYDE1Q6ZW31 735 aaPredicted RBP13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CLNKQ7Z7G1 428 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 PRELID2Q8N945 189 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 MARK4Q96L34 752 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 MED18Q9BUE0 208 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 OR8D2Q9GZM6 311 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 PCBD2Q9H0N5 130 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CALHM2Q9HA72 323 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CLK4Q9HAZ1 481 aaKnown RBP13.15□□□□□ -0.3
PDE6D-203ENST00000428104 PRTFDC1Q9NRG1 225 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 ZNF226Q9NYT6 803 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CRYL1Q9Y2S2 319 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 NCKAP5O14513 1909 aa13.15□□□□□ -0.3
PDE6D-203ENST00000428104 MGAM2Q2M2H8 2515 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 A8MXE2 369 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 GOLGA8KD6RF30 607 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 H3BMM5 538 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 GOLGA8TH3BQL2 631 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 ZBTB14O43829 449 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 NRDCO43847 1150 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 ESR1P03372 595 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 IFNA16P05015 189 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 ASPHQ12797 758 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 SLC13A2Q13183 592 aa13.14□□□□□ -0.31
PDE6D-203ENST00000428104 TCEAL1Q15170 157 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms