RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 ARHGAP22Q7Z5H3 698 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 COMMD2Q86X83 199 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 PTOV1Q86YD1 416 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 CREBRFQ8IUR6 639 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 CFAP206Q8IYR0 622 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 ARHGAP24Q8N264 748 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 ZNF397Q8NF99 534 aaPredicted RBP3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 SSMEM1Q8WWF3 244 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 DNASE1L2Q92874 299 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 BICD1Q96G01 975 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 SLX1AQ9BQ83 275 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 NEURL2Q9BR09 285 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 BTBD10Q9BSF8 475 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 PI4K2AQ9BTU6 479 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 FAM49AQ9H0Q0 323 aaPredicted RBP3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 TRPV6Q9H1D0 765 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 NXF3Q9H4D5 531 aaKnown RBP3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 TRPV4Q9HBA0 871 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 UBE2TQ9NPD8 197 aaPredicted RBP3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 ADPRHL2Q9NX46 363 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 GDAP2Q9NXN4 497 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 ITGA11Q9UKX5 1188 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 VDAC3Q9Y277 283 aa3.88□□□□□ -1.79
SDCBPP2-201ENST00000424643 LTBP2Q14767 1821 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MED19A0JLT2 244 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 PES1O00541 588 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ST8SIA3O43173 380 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ZSCAN12O43309 604 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RPS6KA5O75582 802 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ERLIN2O94905 339 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 NTN1O95631 604 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 IGHV2-70P01814 119 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RLN1P04808 185 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 LIPFP07098 398 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 H1F0P07305 194 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TPM1P09493 284 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 SMIM18P0DKX4 95 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 DLATP10515 647 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 SAGP10523 405 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CYP11B1P15538 503 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TNNI1P19237 187 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MSNP26038 577 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CYLC1P35663 651 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 USP8P40818 1118 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RPL34P49207 117 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MMP15P51511 669 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ALDH3A2P51648 485 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MFAP3P55082 362 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 NOP14P78316 857 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CDR2Q01850 454 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RELQ04864 619 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 AP1B1Q10567 949 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CETN1Q12798 172 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CUL2Q13617 745 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CUL3Q13618 768 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 FHL1Q13642 323 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 PKN2Q16513 984 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MDH1BQ5I0G3 518 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 SPOPLQ6IQ16 392 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 PLBD1Q6P4A8 553 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ZNF549Q6P9A3 640 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ASB18Q6ZVZ8 466 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CATSPER4Q7RTX7 472 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 NUP54Q7Z3B4 507 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 SLC47A2Q86VL8 602 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ZNF677Q86XU0 584 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 PELI3Q8N2H9 469 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RNF10Q8N5U6 811 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 LRRC52Q8N7C0 313 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RBMXL3Q8N7X1 1067 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 UXS1Q8NBZ7 420 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 KRT35Q92764 455 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MIB2Q96AX9 1013 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 BSCL2Q96G97 398 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CABS1Q96KC9 395 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 GLT1D1Q96MS3 346 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 DEFB118Q96PH6 123 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 AGPAT1Q99943 283 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TCHPQ9BT92 498 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MTMR12Q9C0I1 747 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CSTL1Q9H114 145 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RPF1Q9H9Y2 349 aaKnown RBP3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CYP3A43Q9HB55 503 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ACKR4Q9NPB9 350 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 ACP6Q9NPH0 428 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 RGS18Q9NS28 235 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 WNT16Q9UBV4 365 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TRIM10Q9UDY6 481 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TBX21Q9UL17 535 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 MTUS1Q9ULD2 1270 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TFR2Q9UP52 801 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 HES2Q9Y543 173 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TANC1Q9C0D5 1861 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 TRIP11Q15643 1979 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 CITO14578 2027 aa3.87□□□□□ -1.79
SDCBPP2-201ENST00000424643 DNAH12Q6ZR08 3092 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms