RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 GET4Q7L5D6 327 aaPredicted RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 NLRP8Q86W28 1048 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 SLC44A2Q8IWA5 706 aaPredicted RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 OPALINQ96PE5 141 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 HHATLQ9HCP6 504 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 SH3BP4Q9P0V3 963 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 CFL2Q9Y281 166 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 LEFTY2O00292 366 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 CCRL2O00421 344 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 LRRTM2O43300 516 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 SSTR4P31391 388 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 GALK2Q01415 458 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 SRSF11Q05519 484 aaKnown RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 CSTF3Q12996 717 aaKnown RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 KRR1Q13601 381 aaKnown RBP13.72□□□□□ -0.21
MSH5-206ENST00000423982 MICAQ29983 383 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 ATP13A5Q4VNC0 1218 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 ADGRF1Q5T601 910 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 FAM180BQ6P0A1 224 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 PAQR6Q6TCH4 344 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 TRIM48Q8IWZ4 208 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 CMTM8Q8IZV2 173 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 APCDD1Q8J025 514 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 PLD4Q96BZ4 506 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 FAM129BQ96TA1 746 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 TRIM39Q9HCM9 518 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 C11orf16Q9NQ32 467 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 KLHL20Q9Y2M5 609 aa13.72□□□□□ -0.21
MSH5-206ENST00000423982 EFCAB10A6NFE3 127 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 C1SP09871 688 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CHRNB1P11230 501 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 IL7P13232 177 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CNR2P34972 360 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 SLC6A12P48065 614 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 HOXC5Q00444 222 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CD83Q01151 205 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 DLX2Q07687 328 aaPredicted RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 HYAL1Q12794 435 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CDKN3Q16667 212 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 RAB43Q86YS6 212 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 L3MBTL4Q8NA19 623 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 OR8J2Q8NGG1 315 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 OR5AK3PQ8NH89 298 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CSGALNACT1Q8TDX6 532 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 POP5Q969H6 163 aaKnown RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 MRPL38Q96DV4 380 aaKnown RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 CD84Q9UIB8 345 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 POFUT2Q9Y2G5 429 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 PCM1Q15154 2024 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 HELZP42694 1942 aaKnown RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 MUC3AQ02505 3323 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 MTCL1Q9Y4B5 1905 aaKnown RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 A0A0B4J293 547 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 PRPH2P23942 346 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 ZNF385BQ569K4 471 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 DENND6BQ8NEG7 585 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 NFKBIDQ8NI38 313 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 RNF31Q96EP0 1072 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 VPS29Q9UBQ0 182 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
MSH5-206ENST00000423982 MAU2Q9Y6X3 613 aa13.71□□□□□ -0.21
MSH5-206ENST00000423982 OBSL1O75147 1896 aa13.71□□□□□ -0.22
MSH5-206ENST00000423982 PRAMEF33A0A0G2JMD5 474 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 E7EQ34 232 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 PRAMEF10O60809 474 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 SOX14O95416 240 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 GASTP01350 101 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 VIPR2P41587 438 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 PFN3P60673 137 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 RAE1P78406 368 aaKnown RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 IRF8Q02556 426 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 UAP1L1Q3KQV9 507 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 C19orf48Q6RUI8 117 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 PTCHD4Q6ZW05 846 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ZNF367Q7RTV3 350 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 LRRC70Q7Z2Q7 622 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ZNF438Q7Z4V0 828 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ABI3BPQ7Z7G0 1075 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 GLCCI1Q86VQ1 547 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 LMNTD1Q8N9Z9 388 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 AQP11Q8NBQ7 271 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TP53I13Q8NBR0 393 aaPredicted RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 OR7G1Q8NGA0 311 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 RNF170Q96K19 258 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 DHRS1Q96LJ7 313 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms