RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 GNLYP22749 145 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 HSD17B7P56937 341 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 TLR1Q15399 786 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 FCRLBQ6BAA4 426 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 RPUSD3Q6P087 351 aaKnown RBP19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 CRLF3Q8IUI8 442 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 CYP4X1Q8N118 509 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 ARMC10Q8N2F6 343 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 SCYL1Q96KG9 808 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 MTERF1Q99551 399 aaKnown RBP19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 ACTR8Q9H981 624 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 ADGRE2Q9UHX3 823 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 PPT2Q9UMR5 302 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 PCDHGA11Q9Y5H2 935 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 F10P00742 488 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 HPDP32754 393 aaPredicted RBP19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 BSGP35613 385 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 PIK3CGP48736 1102 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 NEK2P51955 445 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 RPS13P62277 151 aaKnown RBP19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 AP2B1P63010 937 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ZRSR2Q15696 482 aaKnown RBP19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 CPSF6Q16630 551 aaKnown RBP eCLIP19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 GGTA1PQ4G0N0 100 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ACER2Q5QJU3 275 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 MRM1Q6IN84 353 aaKnown RBP19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 TDRPQ86YL5 185 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF595Q8IYB9 648 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ACMSDQ8TDX5 336 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ADAMTS18Q8TE60 1221 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 ANGPTL3Q9Y5C1 460 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 LRRK2Q5S007 2527 aa19.29■□□□□ 0.68
PKNOX1-202ENST00000418336 A0A088AWK7 358 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 PSMD12O00232 456 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 FOXE1O00358 373 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 DLX3O60479 287 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 CLDN9O95484 217 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 CBX6O95503 412 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF10P21506 573 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 ARFIP1P53367 373 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 VSNL1P62760 191 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 RASA2Q15283 850 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 TERF2Q15554 542 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 UNC50Q53HI1 259 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 LGSNQ5TDP6 509 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF324BQ6AW86 544 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 OR4C11Q6IEV9 310 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 LCA5Q86VQ0 697 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 BEST3Q8N1M1 668 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 SRFBP1Q8NEF9 429 aaKnown RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 ANKRD9Q96BM1 317 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 TAAR6Q96RI8 345 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 ROGDIQ9GZN7 287 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 PRTFDC1Q9NRG1 225 aa19.28■□□□□ 0.68
PKNOX1-202ENST00000418336 PTPN13Q12923 2485 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 A0A0A6YYD5 115 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 IQANK1A0A1B0GTG1 560 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 GOLGA8RI6L899 631 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 CTNSO60931 367 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 SMIM24O75264 130 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 EEDO75530 441 aaKnown RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 PYGBP11216 843 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 CDH13P55290 713 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 ARG2P78540 354 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 IGLV3-21P80748 117 aaPredicted RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 MRPL49Q13405 166 aaKnown RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 CUL3Q13618 768 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 DDX39BQ13838 428 aaKnown RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF678Q5SXM1 525 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 LETMD1Q6P1Q0 360 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 CHSY3Q70JA7 882 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF227Q86WZ6 799 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 ZCCHC7Q8N3Z6 543 aaKnown RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 MDS2Q8NDY4 140 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 OR4F6Q8NGB9 312 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 CNDP1Q96KN2 507 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 TMEM237Q96Q45 408 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 KCNK13Q9HB14 408 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 SEMA4BQ9NPR2 832 aaPredicted RBP19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 STMN3Q9NZ72 180 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 TBK1Q9UHD2 729 aa19.27■□□□□ 0.68
PKNOX1-202ENST00000418336 RP1L1Q8IWN7 2480 aaPredicted RBP19.27■□□□□ 0.67
PKNOX1-202ENST00000418336 HIVEP3Q5T1R4 2406 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 NBPF19A0A087WUL8 3843 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 OR5H15A6NDH6 313 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 TMEM200CA6NKL6 621 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 A8MUI8 341 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 TMPRSS11DO60235 418 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 HSD17B3P37058 310 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ST13P50502 369 aaKnown RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 HNRNPH2P55795 449 aaKnown RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ZNF33BQ06732 778 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ACTN3Q08043 901 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 TGM3Q08188 693 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ZNF468Q5VIY5 522 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 CLNKQ7Z7G1 428 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 LGI4Q8N135 537 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 PTPMT1Q8WUK0 201 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 RGMAQ96B86 450 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms