RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 TMEM214Q6NUQ4 689 aaKnown RBP19.72■□□□□ 0.75
CASC3-203ENST00000418132 ABHD13Q7L211 337 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 PLXDC1Q8IUK5 500 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 MCATQ8IVS2 390 aaKnown RBP19.72■□□□□ 0.75
CASC3-203ENST00000418132 FAM47BQ8NA70 645 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 RSRC1Q96IZ7 334 aaKnown RBP19.72■□□□□ 0.75
CASC3-203ENST00000418132 CCDC3Q9BQI4 270 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 COPS7BQ9H9Q2 264 aaPredicted RBP19.72■□□□□ 0.75
CASC3-203ENST00000418132 C11orf16Q9NQ32 467 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.72■□□□□ 0.75
CASC3-203ENST00000418132 PCDHGA5Q9Y5G8 931 aa19.72■□□□□ 0.75
CASC3-203ENST00000418132 MN1Q10571 1320 aaPredicted RBP19.71■□□□□ 0.75
CASC3-203ENST00000418132 FAM86C2PA6NEL3 165 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 SRPX2O60687 465 aaPredicted RBP19.71■□□□□ 0.75
CASC3-203ENST00000418132 GSNP06396 782 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 GABRA4P48169 554 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 MTPNP58546 118 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 SELPLGQ14242 412 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 DEFB110Q30KQ9 67 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 NDUFAF5Q5TEU4 345 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 AAGABQ6PD74 315 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 SPRED1Q7Z699 444 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 Q8N9G6 341 aaPredicted RBP19.71■□□□□ 0.75
CASC3-203ENST00000418132 ZCCHC10Q8TBK6 192 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 PHF12Q96QT6 1004 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 SH3GL1Q99961 368 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 FAIM2Q9BWQ8 316 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 ALG2Q9H553 416 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 S100A14Q9HCY8 104 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 TAS2R7Q9NYW3 318 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 EHD3Q9NZN3 535 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 GMPR2Q9P2T1 348 aaKnown RBP19.71■□□□□ 0.75
CASC3-203ENST00000418132 GMEB2Q9UKD1 530 aa19.71■□□□□ 0.75
CASC3-203ENST00000418132 NVLO15381 856 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 BCAS2O75934 225 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 DDX5P17844 614 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 ALOX12P18054 663 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 GSK3BP49841 420 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 LIPEQ05469 1076 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 TRAP1Q12931 704 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 AMZ1Q400G9 498 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 WDR74Q6RFH5 385 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 NATD1Q8N6N6 113 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 GOT1L1Q8NHS2 421 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 SLC26A7Q8TE54 656 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 PYDC1Q8WXC3 89 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 SERINC2Q96SA4 455 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 CPPED1Q9BRF8 314 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 NLNQ9BYT8 704 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ARRDC1-AS1Q9H2J1 176 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 IKZF5Q9H5V7 419 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 LYARQ9NX58 379 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 SEMA5BQ9P283 1151 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ATG4BQ9Y4P1 393 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 RP1P56715 2156 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 EME2A4GXA9 379 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 DNAJA2O60884 412 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ZBTB11O95625 1053 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 BAG2O95816 211 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ZCCHC18P0CG32 403 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 EFNA1P20827 205 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 CSF2RBP32927 897 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ALDH9A1P49189 494 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 FLOT2Q14254 428 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 ARHGEF39Q8N4T4 335 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 EID2Q8N6I1 236 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 HIPK4Q8NE63 616 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 JADE3Q92613 823 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 CIDECQ96AQ7 238 aaPredicted RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 NAF1Q96HR8 494 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 ZNF285Q96NJ3 590 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 PCDHAC1Q9H158 963 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 PDE7BQ9NP56 450 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 AP3M1Q9Y2T2 418 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 MRPS2Q9Y399 296 aaKnown RBP19.7■□□□□ 0.74
CASC3-203ENST00000418132 SLC22A7Q9Y694 548 aa19.7■□□□□ 0.74
CASC3-203ENST00000418132 WDFY4Q6ZS81 3184 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 A0A1W2PR48 441 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 TXNDC9O14530 226 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 CPSF4O95639 269 aaKnown RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 ENGP17813 658 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 ZNF10P21506 573 aaPredicted RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 MLLT3P42568 568 aaPredicted RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 NUBP1P53384 320 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 BNIP2Q12982 314 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 SQSTM1Q13501 440 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 PRTGQ2VWP7 1150 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 DEFB134Q4QY38 66 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 GUSBP11Q6P575 273 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 DNAJC9Q8WXX5 260 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 AURKBQ96GD4 344 aaPredicted RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 GTPBP2Q9BX10 602 aaKnown RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 SMOC1Q9H4F8 434 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 PLCL2Q9UPR0 1127 aa19.69■□□□□ 0.74
CASC3-203ENST00000418132 NUP214P35658 2090 aaPredicted RBP19.69■□□□□ 0.74
CASC3-203ENST00000418132 PROM1O43490 865 aa19.68■□□□□ 0.74
CASC3-203ENST00000418132 ZNF621Q6ZSS3 439 aa19.68■□□□□ 0.74
CASC3-203ENST00000418132 USP53Q70EK8 1073 aa19.68■□□□□ 0.74
CASC3-203ENST00000418132 THUMPD3Q9BV44 507 aaKnown RBP19.68■□□□□ 0.74
CASC3-203ENST00000418132 SOHLH2Q9NX45 425 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms