RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 EDDM13A0A1B0GTR0 161 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PABPN1LA6NDY0 278 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 NPIPB15A6NHN6 443 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 A8MX80 341 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 WASH3PC4AMC7 463 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 H7C0S8 307 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 BIRC5O15392 142 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLIN3O60664 434 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 EDF1O60869 148 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SMIM24O75264 130 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ECI2O75521 394 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CLDN7O95471 211 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 HSPA4LO95757 839 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 IL1BP01584 269 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 BPGMP07738 259 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 DHRS4L1P0CG22 281 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC35E2BP0CK96 405 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 RALBP11234 206 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLA2G2AP14555 144 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PKMP14618 531 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CPA3P15088 417 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF30P17039 623 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF7P17097 686 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TAC1P20366 129 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 FMO4P31512 558 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 HNF1BP35680 557 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 HMGCLP35914 325 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 EIF2DP41214 584 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PSMD8P48556 350 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRKAA2P54646 552 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TAS2R39P59534 338 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 RPL15P61313 204 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SEMG2Q02383 582 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TLE3Q04726 772 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 STX3Q13277 289 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 MSLNQ13421 630 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ITGA9Q13797 1035 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF234Q14588 700 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ITIH4Q14624 930 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PCLAFQ15004 111 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM83EQ2M2I3 478 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF284Q2VY69 593 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ITPRIPL2Q3MIP1 535 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRC73Q5JTD7 316 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CFAP157Q5JU67 520 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LYPLAL1Q5VWZ2 237 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRC66Q68CR7 880 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PTRHD1Q6GMV3 140 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 UGT3A1Q6NUS8 523 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM88Q6PEY1 159 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 BRAT1Q6PJG6 821 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CERS6Q6ZMG9 384 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 RGS9BPQ6ZS82 235 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZCCHC23Q6ZST2 131 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CDHR3Q6ZTQ4 885 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TPRG1Q6ZUI0 275 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SNX20Q7Z614 316 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TSPAN33Q86UF1 283 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPSM1Q86YR5 675 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CRLF3Q8IUI8 442 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 MFSD6LQ8IWD5 586 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 RBFAQ8N0V3 343 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR4N4Q8N0Y3 316 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PAQR4Q8N4S7 273 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR2A12Q8NGT7 310 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF75CPQ92670 426 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 MIB2Q96AX9 1013 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ULK4Q96C45 1275 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ECHDC3Q96DC8 303 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC126Q96EE4 140 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 THOC1Q96FV9 657 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LMLNQ96KR4 655 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 NSMCE3Q96MG7 304 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRC3BQ96PB8 259 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF317Q96PQ6 595 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SMIM14Q96QK8 99 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 OLFM1Q99784 485 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 MECRQ9BV79 373 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRMT61BQ9BVS5 477 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CLPBQ9H078 707 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 POMKQ9H5K3 350 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM96AQ9H5X1 160 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ASB8Q9H765 288 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRPV4Q9HBA0 871 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 NMRAL1Q9HBL8 299 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 POPDC3Q9HBV1 291 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SYTL2Q9HCH5 934 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 HPS4Q9NQG7 708 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELOVL2Q9NXB9 296 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TAS2R13Q9NYV9 303 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 GTSE1Q9NYZ3 720 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 NCKIPSDQ9NZQ3 722 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 IL17CQ9P0M4 197 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM216Q9P0N5 145 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 MARCH4Q9P2E8 410 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CPSF2Q9P2I0 782 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 COPG2Q9UBF2 871 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLCO3A1Q9UIG8 710 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CD207Q9UJ71 328 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 GNPTGQ9UJJ9 305 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms