RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ASNA1O43681 348 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 KERAO60938 352 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 SUPT3HO75486 399 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 GMPRP36959 345 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 KCNC1P48547 511 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 IRF8Q02556 426 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 DLG1Q12959 904 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 MRGPRGQ86SM5 289 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 SPPL2CQ8IUH8 684 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 LURAP1LQ8IV03 231 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 C7orf57Q8NEG2 295 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 ITLN2Q8WWU7 325 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-208ENST00000417285 VMP1Q96GC9 406 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 CCDC120Q96HB5 630 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 ATOH8Q96SQ7 321 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 COPS7BQ9H9Q2 264 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-208ENST00000417285 IGSF5Q9NSI5 407 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 NPIPA1Q9UND3 350 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 TRBV11-1A0A0K0K1C0 115 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 PRSS44E7EML9 344 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CYR61O00622 381 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 PRAMEF4O60810 478 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CTNSO60931 367 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 WISP2O76076 250 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 TBX6O95947 436 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-208ENST00000417285 ESRRAP11474 423 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CHIT1Q13231 466 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 PRAMEF9Q5VWM5 478 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 XKRXQ6PP77 449 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 Q6ZPB1 254 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-208ENST00000417285 VN1R5Q7Z5H4 357 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 TICAM1Q8IUC6 712 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 SIAH3Q8IW03 269 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 TMEM132CQ8N3T6 1108 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 POGLUT1Q8NBL1 392 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF592Q92610 1267 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 MRRFQ96E11 262 aaKnown RBP23.64■■□□□ 1.37
VEGFA-208ENST00000417285 KCNC2Q96PR1 638 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CCDC77Q9BR77 488 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 DAPP1Q9UN19 280 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 ABCA12Q86UK0 2595 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CROCCQ5TZA2 2017 aa23.64■■□□□ 1.37
VEGFA-208ENST00000417285 CCDC189A1A4V9 331 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 SYCE1LA8MT33 242 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 KLRC4-KLRK1H3BQV0 150 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 UBXN8O00124 270 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 LIM2P55344 173 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 E2F2Q14209 437 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 UAP1Q16222 522 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-208ENST00000417285 FAM83EQ2M2I3 478 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 MROH9Q5TGP6 573 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF227Q86WZ6 799 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 MMGT1Q8N4V1 131 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 TMEM156Q8N614 296 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 MNS1Q8NEH6 495 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 UBTD2Q8WUN7 234 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 NXNL1Q96CM4 212 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 TBCDQ9BTW9 1192 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 TSPYL1Q9H0U9 437 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 PRM3Q9NNZ6 103 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 ADAP2Q9NPF8 381 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 PRDM7Q9NQW5 492 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 OPTCQ9UBM4 332 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 FBXW2Q9UKT8 454 aa23.63■■□□□ 1.37
VEGFA-208ENST00000417285 KLF13Q9Y2Y9 288 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-208ENST00000417285 K7EPI3 171 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 ZFAND5O76080 213 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF24P17028 368 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 EPORP19235 508 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 CD22P20273 847 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 AGAP20933 346 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 SERPINB1P30740 379 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 GPR143P51810 404 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 SMSP52788 366 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 PCDH1Q08174 1060 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 BMPR2Q13873 1038 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 ELAVL1Q15717 326 aaKnown RBP23.62■■□□□ 1.37
VEGFA-208ENST00000417285 TMEM35AQ53FP2 167 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 CHSY3Q70JA7 882 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 GHDCQ8N2G8 530 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 RHEBL1Q8TAI7 183 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 MARVELD3Q96A59 401 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 F2RL3Q96RI0 385 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 LYRM4Q9HD34 91 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 CHST11Q9NPF2 352 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 NINJ2Q9NZG7 142 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 YARS2Q9Y2Z4 477 aaKnown RBP23.62■■□□□ 1.37
VEGFA-208ENST00000417285 ASB1Q9Y576 335 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 CLDN16Q9Y5I7 305 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 CLCA3PQ9Y6N3 262 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 APCP25054 2843 aa23.62■■□□□ 1.37
VEGFA-208ENST00000417285 C2P06681 752 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 C3AR1Q16581 482 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 RELL1Q8IUW5 271 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 CENPLQ8N0S6 344 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-208ENST00000417285 FAM47BQ8NA70 645 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 KCTD4Q8WVF5 259 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 DAZLQ92904 295 aaKnown RBP23.61■■□□□ 1.37
VEGFA-208ENST00000417285 NCLNQ969V3 563 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 TSPAN10Q9H1Z9 355 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms