RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CUL3Q13618 768 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 COL9A3Q14050 684 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GRB14Q14449 540 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ELAVL3Q14576 367 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GANABQ14697 944 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MFSD13AQ14CX5 517 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 RTP5Q14D33 572 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 EIF4HQ15056 248 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 P2RY14Q15391 338 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TPSAB1Q15661 275 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TSC22D1Q15714 1073 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 RBBP7Q16576 425 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 STX1AQ16623 288 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ME3Q16798 604 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ODF4Q2M2E3 257 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM44Q2T9K0 475 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GOLGA7BQ2TAP0 167 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 C18orf21Q32NC0 220 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ALKBH6Q3KRA9 238 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 Q4G0T1 1027 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GAGE13Q4V321 117 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CMPK2Q5EBM0 449 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TCHHL1Q5QJ38 904 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CEP85LQ5SZL2 805 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 C6orf183Q5T699 404 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM46CQ5VWP2 391 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DENND2CQ68D51 928 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 NAIF1Q69YI7 327 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 HIST2H2AA3Q6FI13 130 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 H3F3CQ6NXT2 135 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZC3H14Q6PJT7 736 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DOK6Q6PKX4 331 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM220Q6QAJ8 160 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF474Q6S9Z5 364 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PRSS55Q6UWB4 352 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 VSTM1Q6UX27 236 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ETV3LQ6ZN32 361 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 RNF207Q6ZRF8 634 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SPRED1Q7Z699 444 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 LONP2Q86WA8 852 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC26A11Q86WA9 606 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TMPRSS6Q8IU80 811 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM20CQ8IXL6 584 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SELENOHQ8IZQ5 122 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 IQCKQ8N0W5 287 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SHISA5Q8N114 240 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GPC2Q8N158 579 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC4FQ8N1N0 589 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF808Q8N4W9 903 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF276Q8N554 614 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ARFGAP1Q8N6T3 406 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DTX3Q8N9I9 347 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 KBTBD3Q8NAB2 608 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 COLGALT1Q8NBJ5 622 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 OR51L1Q8NGJ5 315 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 OR10Q1Q8NGQ4 319 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC35B2Q8TB61 432 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DYDC1Q8WWB3 177 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PHYHIPQ92561 330 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GTF2H4Q92759 462 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 IGSF8Q969P0 613 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 RAD51AP1Q96B01 352 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZBTB9Q96C00 473 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PPP1R16AQ96I34 528 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DCAF5Q96JK2 942 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 LCORQ96JN0 433 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SERAC1Q96JX3 654 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM20AQ96MK3 541 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 GUCD1Q96NT3 240 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SIGLEC11Q96RL6 698 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 APOL2Q9BQE5 337 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 C7orf50Q9BRJ6 194 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TTYH2Q9BSA4 534 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PCGF1Q9BSM1 259 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CCDC28BQ9BUN5 200 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ST6GALNAC5Q9BVH7 336 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 HINT2Q9BX68 163 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TEKT3Q9BXF9 490 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM39BQ9GZU3 492 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC6A15Q9H2J7 730 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ZDHHC6Q9H6R6 413 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 DCLRE1BQ9H816 532 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MARCH7Q9H992 704 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CALHM2Q9HA72 323 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 UBTD1Q9HAC8 227 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ELOVL3Q9HB03 270 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 C12orf10Q9HB07 376 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CDH20Q9HBT6 801 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MCCC2Q9HCC0 563 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC40A1Q9NP59 571 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MYOZ2Q9NPC6 264 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TREX1Q9NSU2 369 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM248Q9NWD8 314 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SMPD4Q9NXE4 827 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MS4A12Q9NXJ0 267 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ARL15Q9NXU5 204 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 SPHK1Q9NYA1 384 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MRPL39Q9NYK5 338 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 USE1Q9NZ43 259 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CD274Q9NZQ7 290 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms