RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 PIGAP37287 484 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 CXCR4P61073 352 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 ISL1P61371 349 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 RPS13P62277 151 aaKnown RBP14.15□□□□□ -0.14
USP4-203ENST00000415188 RBBP4Q09028 425 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 PDE7AQ13946 482 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 SLBPQ14493 270 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP4-203ENST00000415188 GPR107Q5VW38 600 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 KDM4DQ6B0I6 523 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 RAET1GQ6H3X3 334 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 NXPE4Q6UWF7 544 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 LCTLQ6UWM7 567 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 IKBIPQ70UQ0 350 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 ARHGAP22Q7Z5H3 698 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 TRAPPC5Q8IUR0 188 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 CFAP206Q8IYR0 622 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 CLECL1Q8IZS7 167 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 HS3ST5Q8IZT8 346 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 C11orf65Q8NCR3 313 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 OR2L2Q8NH16 312 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 CDC26Q8NHZ8 85 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 RAB2BQ8WUD1 216 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 SLC5A11Q8WWX8 675 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 HSH2DQ96JZ2 352 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 EPYCQ99645 322 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 BCL7BQ9BQE9 202 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 BTBD1Q9H0C5 482 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 OR2AG1Q9H205 316 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 ADNPQ9H2P0 1102 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 FANCEQ9HB96 536 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 MYNNQ9NPC7 610 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 CCDC177Q9NQR7 707 aaPredicted RBP14.15□□□□□ -0.14
USP4-203ENST00000415188 DYRK4Q9NR20 520 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 SERGEFQ9UGK8 458 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 FZD4Q9ULV1 537 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.15□□□□□ -0.14
USP4-203ENST00000415188 SNX5Q9Y5X3 404 aa14.15□□□□□ -0.14
USP4-203ENST00000415188 GNG14A0A1W2PPG7 69 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 PIPSLA2A3N6 862 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 C1QTNF3-AMACRE9PGA6 284 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 JRKO75564 520 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 ETHE1O95571 254 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 NPPBP16860 134 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 DDX5P17844 614 aaKnown RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 KELP23276 732 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 PTX3P26022 381 aaPredicted RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 ACADLP28330 430 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 HSD17B2P37059 387 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 YAP1P46937 504 aaKnown RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 CSNK1EP49674 416 aaKnown RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 RGNQ15493 299 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 NEDD8Q15843 81 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 POM121L1PQ3SYA9 428 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 ADAMTSL4Q6UY14 1074 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 SLC30A8Q8IWU4 369 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 LRRC56Q8IYG6 542 aaPredicted RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 SPARTQ8N0X7 666 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 METTL4Q8N3J2 472 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP4-203ENST00000415188 GANCQ8TET4 914 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 LZICQ8WZA0 190 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 APOL4Q9BPW4 351 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 HDAC8Q9BY41 377 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 ZDHHC5Q9C0B5 715 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 PCED1AQ9H1Q7 454 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 REEP1Q9H902 201 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 PLGRKTQ9HBL7 147 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 VNN3Q9NY84 501 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 GULP1Q9UBP9 304 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 CDC14AQ9UNH5 594 aa14.14□□□□□ -0.15
USP4-203ENST00000415188 WBP11Q9Y2W2 641 aaKnown RBP14.14□□□□□ -0.15
USP4-203ENST00000415188 KLHL33A6NCF5 533 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 SLC1A7O00341 560 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 MID1O15344 667 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 IL7RP16871 459 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 ITIH1P19827 911 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 SERPINB1P30740 379 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 CTBSQ01459 385 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 FADDQ13158 208 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 ARHGAP19Q14CB8 494 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 CST6Q15828 149 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 CTU2Q2VPK5 515 aaKnown RBP14.13□□□□□ -0.15
USP4-203ENST00000415188 XAF1Q6GPH4 301 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 UNQ6494/PRO21346Q6UXR6 183 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 MMAAQ8IVH4 418 aaKnown RBP14.13□□□□□ -0.15
USP4-203ENST00000415188 NAXDQ8IW45 347 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 ZC3H7AQ8IWR0 971 aaKnown RBP14.13□□□□□ -0.15
USP4-203ENST00000415188 KRT78Q8N1N4 520 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 NATD1Q8N6N6 113 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 OR4A15Q8NGL6 344 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 CXorf40AQ8TE69 158 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 TMEM121BQ9BXQ6 578 aaPredicted RBP14.13□□□□□ -0.15
USP4-203ENST00000415188 GAREM1Q9H706 876 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 GPN2Q9H9Y4 310 aaPredicted RBP14.13□□□□□ -0.15
USP4-203ENST00000415188 FBXL12Q9NXK8 326 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 ABCG2Q9UNQ0 655 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 BTBD3Q9Y2F9 522 aa14.13□□□□□ -0.15
USP4-203ENST00000415188 PADI2Q9Y2J8 665 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms