RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 HIST2H2AA3Q6FI13 130 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 SLCO4C1Q6ZQN7 724 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 OVCH1Q7RTY7 1134 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 OR2A1Q8NGT9 310 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 NEIL2Q969S2 332 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ZNF285Q96NJ3 590 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 FRG2BQ96QU4 278 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 PITHD1Q9GZP4 211 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 PELI2Q9HAT8 420 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP13A2Q9NQ11 1180 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 TMEM45AQ9NWC5 275 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ARMCX1Q9P291 453 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 TAGLN3Q9UI15 199 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ZNF490Q9ULM2 529 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 TSC22D4Q9Y3Q8 395 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 MYO18BQ8IUG5 2567 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP6AP2A0A1C7CYW4 349 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 FITM1A5D6W6 292 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 NPIPB8E9PQR5 432 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP6AP2O75787 350 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 C1GALT1C1LP0DN25 315 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 IDO1P14902 403 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 PRPH2P23942 346 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SCTRP47872 440 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 STX1BP61266 288 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ERVK-8P63133 956 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 CSTF3Q12996 717 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 FASTKQ14296 549 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ZRSR2Q15696 482 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 C17orf64Q86WR6 236 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 GALNT16Q8N428 558 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 FAM26EQ8N5C1 309 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 GALNT11Q8NCW6 608 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SELENOMQ8WWX9 145 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 PNPLA2Q96AD5 504 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 METTL2AQ96IZ6 378 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SLC26A1Q9H2B4 701 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 FFAR3O14843 346 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 GPR42O15529 346 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SORBS2O94875 1100 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 CCNDBP1O95273 360 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ESRRAP11474 423 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 EZRP15311 586 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 MMP11P24347 488 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 CXCR2P25025 360 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 HTR6P50406 440 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SOX8P57073 446 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 VSX2P58304 361 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 KLF10Q13118 480 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 TSTA3Q13630 321 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 MYBPC3Q14896 1274 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 HERC3Q15034 1050 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 MAPRE2Q15555 327 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 IMPG1Q17R60 797 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 TCHHL1Q5QJ38 904 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 WASHC2DQ5SRD0 308 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 JMJD6Q6NYC1 403 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 PRMT9Q6P2P2 845 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 NXPE4Q6UWF7 544 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 SUSD1Q6UWL2 747 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 Q6ZSR9 355 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 TMPRSS11BQ86T26 416 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 TREML1Q86YW5 311 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 ZFYVE21Q9BQ24 234 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 BRF2Q9HAW0 419 aa16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 MRPS30Q9NP92 439 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 COPG1Q9Y678 874 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-204ENST00000414057 A0A0J9YVX5 310 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 A0A1W2PPV9 198 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 HYKKA2RU49 373 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 LSM1O15116 133 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 PRAMEF4O60810 478 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 CTSVO60911 334 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 RSL1D1O76021 490 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 CBX6O95503 412 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 T-ENOLP0DO92 83 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 HRH2P25021 359 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 PSMB5P28074 263 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 PHEXP78562 749 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 ABATP80404 500 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 EMX2Q04743 252 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 AIMP2Q13155 320 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 NR6A1Q15406 480 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 NKG7Q16617 165 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 MUM1Q2TAK8 710 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 C6orf136Q5SQH8 315 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 IRAK1BP1Q5VVH5 260 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 PRAMEF9Q5VWM5 478 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 TMEM198Q66K66 360 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 MED27Q6P2C8 311 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 RNF44Q7L0R7 432 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 PPP1R32Q7Z5V6 425 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 LAS2Q8IYD9 372 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 KRT78Q8N1N4 520 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 RP9Q8TA86 221 aaKnown RBP16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 WDR20Q8TBZ3 569 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 SEMA3GQ9NS98 782 aa16.02■□□□□ 0.15
SCAMP4-204ENST00000414057 SLC22A11Q9NSA0 550 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms