RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MTERF1Q99551 399 aaKnown RBP24.61■■□□□ 1.53
VEGFA-207ENST00000413642 TBCDQ9BTW9 1192 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 HES7Q9BYE0 225 aa24.61■■□□□ 1.53
VEGFA-207ENST00000413642 GABRR3A8MPY1 467 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 CLDN4O14493 209 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 RIPK2O43353 540 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 MYO1DO94832 1006 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 RBP1P09455 135 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 PIK3CGP48736 1102 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 TAS2R50P59544 299 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 PMP22Q01453 160 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 ELOAQ14241 798 aaKnown RBP24.6■■□□□ 1.53
VEGFA-207ENST00000413642 TMEM35AQ53FP2 167 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 DEPDC1Q5TB30 811 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF324BQ6AW86 544 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-207ENST00000413642 BCORP1Q8N888 145 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 CMTM7Q96FZ5 175 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 PSMG3-AS1Q96PY0 264 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 CDK15Q96Q40 435 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 SLX1AQ9BQ83 275 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 DMRT3Q9NQL9 472 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 OLAHQ9NV23 265 aa24.6■■□□□ 1.53
VEGFA-207ENST00000413642 OR7A17O14581 309 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ABHD2P08910 425 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 SBK3P0C264 359 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 NEK2P51955 445 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 RPS13P62277 151 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 CPSF6Q16630 551 aaKnown RBP eCLIP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 AP5B1Q2VPB7 878 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF766Q5HY98 468 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 LIPJQ5W064 366 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 SPINK14Q6IE38 97 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 CHSY3Q70JA7 882 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 TRMT10CQ7L0Y3 403 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF595Q8IYB9 648 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 APCDD1LQ8NCL9 501 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 MDS2Q8NDY4 140 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 SRFBP1Q8NEF9 429 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 SUN3Q8TAQ9 357 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ADAMTS18Q8TE60 1221 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 NSUN5Q96P11 429 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 UTP23Q9BRU9 249 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 TXLNGYQ9BZA5 131 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 NOL11Q9H8H0 719 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 KLHL1Q9NR64 748 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ERRFI1Q9UJM3 462 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 ZNF223Q9UK11 482 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 FBXW2Q9UKT8 454 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 TNPO3Q9Y5L0 923 aaKnown RBP24.59■■□□□ 1.53
VEGFA-207ENST00000413642 CNTRLQ7Z7A1 2325 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 SCN2AQ99250 2005 aa24.59■■□□□ 1.53
VEGFA-207ENST00000413642 WISP2O76076 250 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 SNRPAP09012 282 aaKnown RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 EDN3P14138 238 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 HIST1H1TP22492 207 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 CNTFP26441 200 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 TPP2P29144 1249 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 SERPINB1P30740 379 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 SSR2P43308 183 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 ID2Q02363 134 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 OR1C1Q15619 314 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 FAM219BQ5XKK7 198 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 RPS27LQ71UM5 84 aaKnown RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 B3GNT7Q8NFL0 401 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 OR52B6Q8NGF0 335 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 SSC4DQ8WTU2 575 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 THAP3Q8WTV1 239 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 ROGDIQ9GZN7 287 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 EPB41L4BQ9H329 900 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 LYRM4Q9HD34 91 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 ABI3Q9P2A4 366 aa24.58■■□□□ 1.53
VEGFA-207ENST00000413642 MRPS33Q9Y291 106 aaKnown RBP24.58■■□□□ 1.53
VEGFA-207ENST00000413642 TRBV11-1A0A0K0K1C0 115 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 CTNSO60931 367 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 LDB3O75112 727 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 RASAL1O95294 804 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 COL6A2P12110 1019 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 MST1P26927 711 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 PIK3CBP42338 1070 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 MLF1P58340 268 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 OC90Q02509 493 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-207ENST00000413642 ZRSR2Q15696 482 aaKnown RBP24.57■■□□□ 1.52
VEGFA-207ENST00000413642 TSNAXIP1Q2TAA8 658 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 OR4C11Q6IEV9 310 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 TMEM151AQ8N4L1 468 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 SREK1Q8WXA9 508 aaKnown RBP24.57■■□□□ 1.52
VEGFA-207ENST00000413642 DEFB126Q9BYW3 111 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 ZBTB26Q9HCK0 441 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 PCTPQ9UKL6 214 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 OSGIN2Q9Y236 505 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 PCDHGA11Q9Y5H2 935 aa24.57■■□□□ 1.52
VEGFA-207ENST00000413642 CPAMD8Q8IZJ3 1885 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 H0YIV9 168 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 PLPP1O14494 284 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 SCELO95171 688 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 ETHE1O95571 254 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 MYBL2P10244 700 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 GPR143P51810 404 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 TDGF1P3P51864 188 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 RAP1GDS1P52306 607 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms