RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 RAE1P78406 368 aaKnown RBP28.86■■■□□ 2.21
CSNK1E-206ENST00000413574 GUCY1A3Q02108 690 aa28.86■■■□□ 2.21
CSNK1E-206ENST00000413574 TLE3Q04726 772 aa28.86■■■□□ 2.21
CSNK1E-206ENST00000413574 ZCCHC7Q8N3Z6 543 aaKnown RBP28.86■■■□□ 2.21
CSNK1E-206ENST00000413574 CSF3RQ99062 836 aa28.86■■■□□ 2.21
CSNK1E-206ENST00000413574 UMODP07911 640 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 RNH1P13489 461 aaKnown RBP28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 HNRNPH2P55795 449 aaKnown RBP28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 ACSM2AQ08AH3 577 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 NR6A1Q15406 480 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 XKR7Q5GH72 579 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 ACSM2BQ68CK6 577 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 CYP20A1Q6UW02 462 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 LRRC69Q6ZNQ3 347 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 FAM47EQ6ZV65 393 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 FAM47BQ8NA70 645 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 OR2Y1Q8NGV0 311 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 STARD8Q92502 1023 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 TBC1D20Q96BZ9 403 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 C19orf60Q96EN9 201 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 CLK4Q9HAZ1 481 aaKnown RBP28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 PADI2Q9Y2J8 665 aa28.85■■■□□ 2.21
CSNK1E-206ENST00000413574 RSL1D1O76021 490 aaKnown RBP28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 FOLR3P41439 243 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 IL10RAQ13651 578 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 CCNYL2Q5T2Q4 361 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 MFSD4BQ5TF39 518 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 RIPOR1Q6ZS17 1223 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 PAGE2Q7Z2X7 111 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 TMEM52Q8NDY8 209 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 NUF2Q9BZD4 464 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 LANCL2Q9NS86 450 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 ZMIZ1Q9ULJ6 1067 aa28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 MAP1BP46821 2468 aaKnown RBP28.84■■■□□ 2.21
CSNK1E-206ENST00000413574 B4GALT2O60909 372 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 SEC22BO75396 215 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 CREG1O75629 220 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 FHP07954 510 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 FAM58BPP0C7Q3 252 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 HNRNPFP52597 415 aaKnown RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 RAB38P57729 211 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 GALNTL6Q49A17 601 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 MINDY4Q4G0A6 757 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 SPIN4Q56A73 249 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 MRM1Q6IN84 353 aaKnown RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 CRLF3Q8IUI8 442 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 EFCAB3Q8N7B9 438 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 C11orf24Q96F05 449 aaPredicted RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 SLC45A3Q96JT2 553 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 C7orf26Q96N11 449 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 MESP1Q9BRJ9 268 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 EFHD1Q9BUP0 239 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 EBPLQ9BY08 206 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 LYRM4Q9HD34 91 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 C14orf105Q9NVL8 296 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 ADAM29Q9UKF5 820 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 NXT1Q9UKK6 140 aaKnown RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 MKL2Q9ULH7 1088 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 ATG4BQ9Y4P1 393 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 ASB4Q9Y574 426 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 A0A087WV48 116 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 PSMD12O00232 456 aaPredicted RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 LSM1O15116 133 aaKnown RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 CD63P08962 238 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 GPR180Q86V85 440 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 OR1F2PQ96R84 312 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 CRB3Q9BUF7 120 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 LRTM1Q9HBL6 345 aa28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 POLR3HQ9Y535 204 aaPredicted RBP28.83■■■□□ 2.21
CSNK1E-206ENST00000413574 ARHGAP10A1A4S6 786 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 CYR61O00622 381 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 NKX2-8O15522 239 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 PCDH7O60245 1069 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 PEX11AO75192 247 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 PRKRAO75569 313 aaKnown RBP28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 PRPH2P23942 346 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 KIAA0040Q15053 153 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 ATP1A1-AS1Q5TC04 95 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 RGS9BPQ6ZS82 235 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 WDR75Q8IWA0 830 aaKnown RBP28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 PIWIL2Q8TC59 973 aaKnown RBP28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 C1orf109Q9NX04 203 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 C3orf18Q9UK00 162 aa28.82■■■□□ 2.2
CSNK1E-206ENST00000413574 IDSB3KWA1 339 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 TCP11X1B4DZS4 312 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 MAPK12P53778 367 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 RFTN2Q52LD8 501 aaPredicted RBP28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 VWA5B1Q5TIE3 1220 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 C18orf63Q68DL7 685 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 FAAH2Q6GMR7 532 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 HOMEZQ8IX15 550 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 KIRREL3Q8IZU9 778 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 VN1R1Q9GZP7 353 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 CPNE5Q9HCH3 593 aa28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 TEX10Q9NXF1 929 aaPredicted RBP28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 DSPP15924 2871 aaKnown RBP28.81■■■□□ 2.2
CSNK1E-206ENST00000413574 A0A1W2PR48 441 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 NPIPB8E9PQR5 432 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 RECKO95980 971 aa28.8■■■□□ 2.2
CSNK1E-206ENST00000413574 FURINP09958 794 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms