RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 TEAD4Q15561 434 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 LCN1P1Q5VSP4 162 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 FRG2Q64ET8 278 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 CCDC149Q6ZUS6 474 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 UBE2R2Q712K3 238 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 FAM20CQ8IXL6 584 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 IQCF2Q8IXL9 164 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 ATP6V1C2Q8NEY4 427 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 NLGN4YQ8NFZ3 816 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 FRG2BQ96QU4 278 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 MTERF1Q99551 399 aaKnown RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 MIXL1Q9H2W2 232 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 TMEM245Q9H330 911 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 TRIM45Q9H8W5 580 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 ING3Q9NXR8 418 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 SH3BP4Q9P0V3 963 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 IQCMA0A1B0GVH7 501 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 FAM227AF5H4B4 570 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 PLD2O14939 933 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 POLR1CO15160 346 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 FGBP02675 491 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 ETFAP13804 333 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 CHMP24386 653 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 PTX3P26022 381 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.043e-6■■■□□ 17.6
SIK3-202ENST00000413553 PCGF2P35227 344 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 HMGCLP35914 325 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 CRYBB2P43320 205 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 MAP2K3P46734 347 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 C1DQ13901 141 aaKnown RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 NFE2L1Q14494 772 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 GLYR1Q49A26 553 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 ATXN7L2Q5T6C5 722 aaPredicted RBP8.54□□□□□ -1.04
SIK3-202ENST00000413553 DDI2Q5TDH0 399 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 C22orf42Q6IC83 251 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 ZNF767PQ75MW2 155 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 GDPD1Q8N9F7 314 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 VPS37AQ8NEZ2 397 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 OR4C15Q8NGM1 316 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 REPS1Q96D71 796 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 NARFLQ9H6Q4 476 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 CWH43Q9H720 699 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 KCNN3Q9UGI6 736 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 SLC22A14Q9Y267 594 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 HCN4Q9Y3Q4 1203 aa8.54□□□□□ -1.04
SIK3-202ENST00000413553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 HYKKA2RU49 373 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 PLA2G10O15496 165 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 MPZL2O60487 215 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 ACSL4O60488 711 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 SOX14O95416 240 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 IGLV3-27P01718 113 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 C1QBP02746 253 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 URODP06132 367 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HIST1H2AGP0C0S8 130 aaPredicted RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 SRCP12931 536 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HIST1H2ADP20671 130 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 CPN2P22792 545 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HLA-DMAP28067 261 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 CRISP1P54107 249 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 RHAGQ02094 409 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 ACSM2AQ08AH3 577 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 MRPL28Q13084 256 aaKnown RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.04
SIK3-202ENST00000413553 CHIT1Q13231 466 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 NFATC2Q13469 925 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 CCDC85BQ15834 202 aaPredicted RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 LEXMQ3ZCV2 418 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 GPRC6AQ5T6X5 926 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 RNF219Q5W0B1 726 aaPredicted RBP8.53□□□□□ -1.04
SIK3-202ENST00000413553 ACSM2BQ68CK6 577 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 KLHL17Q6TDP4 642 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 GDPGP1Q6ZNW5 385 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 GPR155Q7Z3F1 870 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 FAM46DQ8NEK8 389 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 OR4M1Q8NGD0 313 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 OR4A15Q8NGL6 344 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 TTC9Q92623 222 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 BADQ92934 168 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HIST1H2AHQ96KK5 128 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HIST1H2AJQ99878 128 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 MAPKAP1Q9BPZ7 522 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 H2AFJQ9BTM1 129 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 HDHD5Q9BXW7 423 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 ATG10Q9H0Y0 220 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 RDH14Q9HBH5 336 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 DIABLOQ9NR28 239 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 MCUBQ9NWR8 336 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 SPG21Q9NZD8 308 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 NLKQ9UBE8 527 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 KLHL21Q9UJP4 597 aa8.53□□□□□ -1.04
SIK3-202ENST00000413553 NDRG2Q9UN36 371 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms