RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CLEC5AQ9NY25 188 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SHANK3Q9BYB0 1731 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 USP17L4A6NCW7 530 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 LRRC14BA6NHZ5 514 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ZNF99A8MXY4 864 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 H7BY64 318 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PRMT5O14744 637 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 NRP1O14786 923 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 DCXO43602 365 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PLIN3O60664 434 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ITGA10O75578 1167 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GPIP06744 558 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 HEXAP06865 529 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 IGFBP1P08833 259 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 FOLR2P14207 255 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 C5AR1P21730 350 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PITPNBP48739 271 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 DCDP81605 110 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 MYL7Q01449 175 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CHIT1Q13231 466 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 IL18R1Q13478 541 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 LRRC32Q14392 662 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MLC1Q15049 377 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CBWD6Q4V339 395 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PYY3Q5JQD4 70 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CBWD3Q5JTY5 395 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CBWD5Q5RIA9 395 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 STRIP1Q5VSL9 837 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 RNF165Q6ZSG1 346 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 TMPRSS11FQ6ZWK6 438 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ERN2Q76MJ5 926 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 CIR1Q86X95 450 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 CPNE8Q86YQ8 564 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PELI3Q8N2H9 469 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 NAT16Q8N8M0 369 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 OR11H4Q8NGC9 324 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 C9orf43Q8TAL5 461 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 ZSCAN18Q8TBC5 510 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 ACSF2Q96CM8 615 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 AURKBQ96GD4 344 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 FEM1AQ9BSK4 669 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CHRDQ9H2X0 955 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 EPHX3Q9H6B9 360 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 A0A0U1RQF3 1178 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 BCAT2O15382 392 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 LRRTM2O43300 516 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PAPLNO95428 1278 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 FGF19O95750 216 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MMP3P08254 477 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 APOBEC3AP31941 199 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 GCGRP47871 477 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ATP4BP51164 291 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SMSP52788 366 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SNRPFP62306 86 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 MVKQ03426 396 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 LARS2Q15031 903 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 CDNFQ49AH0 187 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 TSTD2Q5T7W7 516 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GCNT7Q6ZNI0 430 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 KIAA0907Q7Z7F0 614 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 FAM181AQ8N9Y4 354 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 OR2T4Q8NH00 348 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 OR56A3Q8NH54 315 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 OR14A16Q8NHC5 309 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ZNF431Q8TF32 576 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 FAF2Q96CS3 445 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 RTP4Q96DX8 246 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 APOL2Q9BQE5 337 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 NXF3Q9H4D5 531 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 PLAC1Q9HBJ0 212 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 APOBEC3BQ9UH17 382 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 SCP2D1Q9UJQ7 156 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PLEKHA6Q9Y2H5 1048 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 DSCR3O14972 297 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PRAMEF2O60811 474 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 IGHV2-5P01817 119 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 HMGCRP04035 888 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 NMBP08949 121 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 HSD17B1P14061 328 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 RHCEP18577 417 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PVALBP20472 110 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 HOXA13P31271 388 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 ARRB2P32121 409 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MAGEB1P43366 347 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GPR4P46093 362 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CTSCP53634 463 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ATXN3P54252 364 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 CXCR4P61073 352 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 E2F1Q01094 437 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SP3Q02447 781 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ZNF155Q12901 538 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 PICALMQ13492 652 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 TAF1AQ15573 450 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 FSCN1Q16658 493 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 SAMD4BQ5PRF9 694 aaKnown RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 KIAA0319Q5VV43 1072 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 DMRTA1Q5VZB9 504 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CES5AQ6NT32 575 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 C1orf94Q6P1W5 598 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms