RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PHF11Q9UIL8 331 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 DAPP1Q9UN19 280 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 TP53TG5Q9Y2B4 290 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 CROCCQ5TZA2 2017 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 SAP18O00422 153 aaKnown RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 RTCAO00442 366 aaKnown RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 PLPP1O14494 284 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 TRIM13O60858 407 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 SPAG7O75391 227 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ESRRBO95718 433 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 UQCRHP07919 91 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 NEK2P51955 445 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 NAGLUP54802 743 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 HSD17B7P56937 341 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 OR4D2P58180 307 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF33BQ06732 778 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ACTN3Q08043 901 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 C19orf57Q0VDD7 668 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 NFATC3Q12968 1075 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 RUNX2Q13950 521 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 PCLAFQ15004 111 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 EXT1Q16394 746 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 CYP20A1Q6UW02 462 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF793Q6ZN11 406 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 FRMD7Q6ZUT3 714 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 LANCL3Q6ZV70 420 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ASB18Q6ZVZ8 466 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 PAGE2Q7Z2X7 111 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ANKRD37Q7Z713 158 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 NUDT13Q86X67 352 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 C10orf107Q8IVU9 208 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 RNF175Q8N4F7 328 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 CDYL2Q8N8U2 506 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ACOT4Q8N9L9 421 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 METTL6Q8TCB7 284 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 TCP10LQ8TDR4 215 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 TM9SF4Q92544 642 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 MTFMTQ96DP5 389 aaKnown RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 FAM111AQ96PZ2 611 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 SMAD5Q99717 465 aaKnown RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 GSTO2Q9H4Y5 243 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 MLXIPLQ9NP71 852 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 MID1IP1Q9NPA3 183 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF71Q9NQZ8 489 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 PRTFDC1Q9NRG1 225 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 ARGLU1Q9NWB6 273 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 LYARQ9NX58 379 aaKnown RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 C5AR2Q9P296 337 aa10.26□□□□□ -0.77
CHMP3-205ENST00000409810 HEMK1Q9Y5R4 338 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-205ENST00000409810 CPAMD8Q8IZJ3 1885 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ARHGAP10A1A4S6 786 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PPP6CO00743 305 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 DPM1O60762 260 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 DNAJB6O75190 326 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ULK1O75385 1050 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SERPINA7P05543 415 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 CPN2P22792 545 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PPP2R1BP30154 601 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 TLX1P31314 330 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 BUD31P41223 144 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 CSTF3Q12996 717 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SLC13A2Q13183 592 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SLAMF1Q13291 335 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PCOLCEQ15113 449 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SFT2D3Q587I9 215 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SGO1Q5FBB7 561 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 BEND6Q5SZJ8 279 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 AGAP7PQ5VUJ5 663 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PLAG1Q6DJT9 500 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 JMJD6Q6NYC1 403 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PAPD4Q6PIY7 484 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 UBE3DQ7Z6J8 389 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PARP9Q8IXQ6 854 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF843Q8N446 348 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 EFCAB3Q8N7B9 438 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 FAM47BQ8NA70 645 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 AGAP11Q8TF27 550 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 TSLPQ969D9 159 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 PGM2Q96G03 612 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 THOC3Q96J01 351 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 CNDP1Q96KN2 507 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 AGAP4Q96P64 663 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 TRMOQ9BU70 441 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 NUDT9Q9BW91 350 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 C12orf65Q9H3J6 166 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 WDR41Q9HAD4 459 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SSU72Q9NP77 194 aaKnown RBP10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF225Q9UK10 706 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ADAM29Q9UKF5 820 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 FBXW2Q9UKT8 454 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 SLC12A4Q9UP95 1085 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 ACTL7BQ9Y614 415 aa10.25□□□□□ -0.77
CHMP3-205ENST00000409810 KALRNO60229 2985 aa10.24□□□□□ -0.77
CHMP3-205ENST00000409810 IGKV3D-11A0A0A0MRZ8 115 aa10.24□□□□□ -0.77
CHMP3-205ENST00000409810 A0A0A6YYD5 115 aa10.24□□□□□ -0.77
CHMP3-205ENST00000409810 A0A1B0GTL3 188 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms