RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 C3orf38Q5JPI3 329 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 MEX3DQ86XN8 651 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 POLR1BQ9H9Y6 1135 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 LINC00854A0A1B0GVQ3 168 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 CPSF4LA6NMK7 179 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 EEDO75530 441 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 CLIC3O95833 236 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 PRKAR1AP10644 381 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 TAS2R38P59533 333 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 HOXC5Q00444 222 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 TRAF3Q13114 568 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 KCNAB2Q13303 367 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 EXOSC7Q15024 291 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 C6orf52Q5T4I8 152 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 METRNLQ641Q3 311 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 PQLC1Q8N2U9 271 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 GLB1L3Q8NCI6 653 aaPredicted RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 C16orf78Q8WTQ4 265 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 FGF21Q9NSA1 209 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 SCN3BQ9NY72 215 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
SNX13-202ENST00000409604 IGHV3-20A0A0C4DH32 117 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 SOBPA7XYQ1 873 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 H3BNH8 94 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 ARPC2O15144 300 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 CH25HO95992 272 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 PSMB9P28065 219 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 ARRB2P32121 409 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 TRPC1P48995 793 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 RPA4Q13156 261 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 DUOXA1Q1HG43 343 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 CCNJQ5T5M9 372 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 ADAMTSL4Q6UY14 1074 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 OR9A2Q8NGT5 310 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 OR2T11Q8NH01 316 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 OR6C1Q96RD1 312 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 RMI1Q9H9A7 625 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 USE1Q9NZ43 259 aa10.87□□□□□ -0.67
SNX13-202ENST00000409604 A0A1W2PQF6 199 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 HNRNPCL2B2RXH8 293 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PLRG1O43660 514 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 UGT2B17O75795 530 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 IFNW1P05000 195 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ALDOCP09972 364 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 MATN1P21941 496 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FCARP24071 287 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ADSLP30566 484 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 GUCA1AP43080 201 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 IST1P53990 364 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 OR4D2P58180 307 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PPP1CAP62136 330 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FGL2Q14314 439 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 LARS2Q15031 903 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 C18orf63Q68DL7 685 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 NLGN4YQ8NFZ3 816 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 L3HYPDHQ96EM0 354 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 GPR78Q96P69 363 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 AIG1Q9NVV5 245 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 TRNAU1APQ9NX07 287 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 OR6C2Q9NZP2 312 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PRUNE2Q8WUY3 3088 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KIR2DS5A0A0G2JLQ3 304 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 A0A0G2JNG1 304 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 H3BSH0 61 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KIR2DS3K7RE56 304 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 HIST1H2ABP04908 130 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ST6GAL1P15907 406 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FBLP22087 321 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 MADCAM1Q13477 382 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KIR2DS5Q14953 304 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 DEPDC1Q5TB30 811 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 EIF3MQ7L2H7 374 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 HIST3H2AQ7L7L0 130 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ZFAND4Q86XD8 727 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 OXR1Q8N573 874 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 OR2L3Q8NG85 312 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 HIST1H2ACQ93077 130 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 BMFQ96LC9 184 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KCNK13Q9HB14 408 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 TEX10Q9NXF1 929 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 KLRF1Q9NZS2 232 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 WNT16Q9UBV4 365 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 MAGEL2Q9UJ55 1249 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 LCTP09848 1927 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 SHISA7A6NL88 538 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 TNFRSF11BO00300 401 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FAM20BO75063 409 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 MC3RP41968 323 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 DUSP3P51452 185 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 CLDN6P56747 220 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PFN3P60673 137 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 YPEL5P62699 121 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KCNC3Q14003 757 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 RPS26P11Q5JNZ5 115 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 CLEC14AQ86T13 490 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms