RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 TBC1D10CQ8IV04 446 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 MFN1Q8IWA4 741 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SMC5Q8IY18 1101 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 GPR137CQ8N3F9 429 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNF491Q8N8L2 437 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SYT2Q8N9I0 419 aaPredicted RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 XXYLT1Q8NBI6 393 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SLC4A11Q8NBS3 891 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 CLEC1AQ8NC01 280 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 CAMKVQ8NCB2 501 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNRF1Q8ND25 227 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 AFAP1L1Q8TED9 768 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 PCNPQ8WW12 178 aaKnown RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SLCO4A1Q96BD0 722 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SPSB1Q96BD6 273 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 FAM122AQ96E09 287 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SIPA1Q96FS4 1042 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 MPP4Q96JB8 637 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 LINC00615Q96LM1 132 aaPredicted RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 GDAP1L1Q96MZ0 367 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 TECTBQ96PL2 329 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 GCNAQ96QF7 691 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 CCT8L2Q96SF2 557 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 BARD1Q99728 777 aaKnown RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 ALKBH7Q9BT30 221 aaPredicted RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 GHITMQ9H3K2 345 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 FZD8Q9H461 694 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 ISG20L2Q9H9L3 353 aaKnown RBP0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 PDE7BQ9NP56 450 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 HAUS2Q9NVX0 235 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 SENP1Q9P0U3 644 aa0.68□□□□□ -2.3
MIR548I3-201ENST00000408378 GTF3C1Q12789 2109 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PTCH1Q13635 1447 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 hCG_1809904A0A1W2PP81 198 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 A0A1W2PPE2 198 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 A0A1W2PR64 198 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TRBC2A0A5B9 178 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TMCO5BA8MYB1 307 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 SAP18O00422 153 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TPD52L2O43399 206 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ADAM20O43506 726 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 SPRY1O43609 319 aaPredicted RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 CELF2O95319 508 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PGM3O95394 542 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 EEF2P13639 858 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 CPN1P15169 458 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PGAM2P15259 253 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PORP16435 677 aaPredicted RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MC5RP33032 325 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 HMGCLP35914 325 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ALDH3B1P43353 468 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MAGEA9P43362 315 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 RXRGP48443 463 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 GEMIN4P57678 1058 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 GNB2P62879 340 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 LRRC63Q05C16 580 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 OVGP1Q12889 678 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 STK4Q13043 487 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 DDX10Q13206 875 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ALCAMQ13740 583 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PPA1Q15181 289 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MEA1Q16626 185 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PPP1R3AQ16821 1122 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 LETM2Q2VYF4 491 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 C14orf28Q4W4Y0 310 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNF542PQ5EBM4 170 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ARMC4Q5T2S8 1044 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 AGAP6Q5VW22 663 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 FAM205BPQ63HN1 556 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 IRGCQ6NXR0 463 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 C2orf66Q6UXQ4 117 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 GCNT7Q6ZNI0 430 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MKXQ8IYA7 352 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 SLC43A2Q8N370 569 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 CD99L2Q8TCZ2 262 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 SLC26A7Q8TE54 656 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TBCKQ8TEA7 893 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 GRK7Q8WTQ7 553 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 NTNG2Q96CW9 530 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 RBM18Q96H35 190 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MXD3Q9BW11 206 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 KLHL4Q9C0H6 718 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 DPEP2Q9H4A9 486 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 IKZF5Q9H5V7 419 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 RPF1Q9H9Y2 349 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MRGBPQ9NV56 204 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNF446Q9NWS9 450 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 CLIC5Q9NZA1 410 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 PCDHGB4Q9UN71 923 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 RNF24Q9Y225 148 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TMEM5Q9Y2B1 443 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 HBS1LQ9Y450 684 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 TRPV2Q9Y5S1 764 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 ZFP37Q9Y6Q3 630 aaPredicted RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 CFAP65Q6ZU64 1925 aaKnown RBP0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 MEGF6O75095 1541 aa0.67□□□□□ -2.3
MIR548I3-201ENST00000408378 SPATA31D1Q6ZQQ2 1576 aa0.66□□□□□ -2.3
MIR548I3-201ENST00000408378 TRAV18A0A075B6X5 111 aa0.66□□□□□ -2.3
MIR548I3-201ENST00000408378 CCDC189A1A4V9 331 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms