RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ATP5A1P25705 553 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 AAGABQ6PD74 315 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ABHD13Q7L211 337 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ANKRD46Q86W74 232 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 SLC35F3Q8IY50 421 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 CARFQ8N187 725 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 TM4SF18Q96CE8 201 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 AHCYL2Q96HN2 611 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 TRAPPC9Q96Q05 1148 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 CCDC3Q9BQI4 270 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 TRIM15Q9C019 465 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ALG2Q9H553 416 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 RNPEPL1Q9HAU8 725 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 LYARQ9NX58 379 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 TOR4AQ9NXH8 423 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 VAPAQ9P0L0 249 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 EXO1Q9UQ84 846 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 TPRP12270 2363 aaKnown RBP19.94■□□□□ 0.78
TPM1-208ENST00000404484 TRBV5-3A0A0A0MS03 114 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 TLCD2A6NGC4 264 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 TMPRSS11DO60235 418 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 SCN2BO60939 215 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 FAM58BPP0C7Q3 252 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 TCN1P20061 433 aaPredicted RBP19.94■□□□□ 0.78
TPM1-208ENST00000404484 PPP1CAP62136 330 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 GPLD1P80108 840 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 LIPEQ05469 1076 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 NR1D2Q14995 579 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 RUNDC3AQ59EK9 446 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 RABL3Q5HYI8 236 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 ANKRD26P1Q6NSI1 321 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 DNAJC14Q6Y2X3 702 aaPredicted RBP19.94■□□□□ 0.78
TPM1-208ENST00000404484 ACOT4Q8N9L9 421 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 TCTN2Q96GX1 697 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 FCRL4Q96PJ5 515 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 KCTD14Q9BQ13 255 aaPredicted RBP19.94■□□□□ 0.78
TPM1-208ENST00000404484 KLHL25Q9H0H3 589 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 PRDM7Q9NQW5 492 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 FTSJ1Q9UET6 329 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 PCDHGB4Q9UN71 923 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 KNTC1P50748 2209 aa19.94■□□□□ 0.78
TPM1-208ENST00000404484 H0YGG7 62 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 TXNDC9O14530 226 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 ACOT8O14734 319 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 NVLO15381 856 aaKnown RBP19.93■□□□□ 0.78
TPM1-208ENST00000404484 DUX1O43812 170 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 PSMG1O95456 288 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 LDOC1O95751 146 aaPredicted RBP19.93■□□□□ 0.78
TPM1-208ENST00000404484 STATHP02808 62 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 FTH1P19P0C7X4 201 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 ST6GAL1P15907 406 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 GSK3BP49841 420 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 ARF3P61204 181 aaPredicted RBP19.93■□□□□ 0.78
TPM1-208ENST00000404484 CCNIQ14094 377 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 ZNF793Q6ZN11 406 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 TNIP2Q8NFZ5 429 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 MACROD1Q9BQ69 325 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 ECSITQ9BQ95 431 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 INPP5KQ9BT40 448 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 CHRNA10Q9GZZ6 450 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 EHD3Q9NZN3 535 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 PCDHB14Q9Y5E9 798 aa19.93■□□□□ 0.78
TPM1-208ENST00000404484 CROCCQ5TZA2 2017 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 A0A0G2JN53 185 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 SIGLEC6O43699 453 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 ZCCHC18P0CG32 403 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 PPIBP23284 216 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 ALDH4A1P30038 563 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 AP2B1P63010 937 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 MC1RQ01726 317 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 SLAMF1Q13291 335 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 MRM1Q6IN84 353 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 TICAM1Q8IUC6 712 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 ENDOVQ8N8Q3 282 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 FAM47BQ8NA70 645 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 FAM156AQ8NDB6 213 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 OR8K5Q8NH50 307 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 OR4C6Q8NH72 309 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 UTP15Q8TED0 518 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 CNDP2Q96KP4 475 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 CPPED1Q9BRF8 314 aaPredicted RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 THUMPD3Q9BV44 507 aaKnown RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 SYNPO2LQ9H987 977 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 SLC25A37Q9NYZ2 338 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 ZNF282Q9UDV7 671 aaPredicted RBP19.92■□□□□ 0.78
TPM1-208ENST00000404484 PADI4Q9UM07 663 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 VPS4AQ9UN37 437 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 NEUROG3Q9Y4Z2 214 aa19.92■□□□□ 0.78
TPM1-208ENST00000404484 SLC9B1P1A6NJY1 282 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 EVPLLA8MZ36 301 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 ZNF888P0CJ79 500 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 HOXB9P17482 250 aaPredicted RBP19.91■□□□□ 0.78
TPM1-208ENST00000404484 HTR1EP28566 365 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PTPN6P29350 595 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 MTPNP58546 118 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 RAB8AP61006 207 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 ZNF385BQ569K4 471 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 FRMPD2BQ6IN97 320 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 DHFR2Q86XF0 187 aa19.91■□□□□ 0.78
TPM1-208ENST00000404484 PTRH1Q86Y79 214 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms