RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 IL23RQ5VWK5 629 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 MLIPQ5VWP3 458 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 TMEM120AQ9BXJ8 343 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 NSRP1Q9H0G5 558 aaKnown RBP31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 EPN3Q9H201 632 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 LYRM4Q9HD34 91 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 KLHL14Q9P2G3 628 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 CTSFQ9UBX1 484 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 ATG4BQ9Y4P1 393 aa31.44■■■□□ 2.62
CSNK1E-204ENST00000403904 IQCJ-SCHIP1C9J366 451 aaPredicted RBP31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 TACR1P25103 407 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 XCR1P46094 333 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 MAP7Q14244 749 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 SMU1Q2TAY7 513 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 TBC1D25Q3MII6 688 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 GPR180Q86V85 440 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 EFCAB3Q8N7B9 438 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 ELAC2Q9BQ52 826 aaKnown RBP31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 RBCK1Q9BYM8 510 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 LYARQ9NX58 379 aaKnown RBP31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 BCKDHAP12694 445 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 SHC2P98077 582 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 MAD2L1Q13257 205 aaPredicted RBP31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 TMEM198Q66K66 360 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 OGFOD2Q6N063 350 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 OVCH1Q7RTY7 1134 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 ZNF282Q9UDV7 671 aaPredicted RBP31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 BAIAP2L1Q9UHR4 511 aa31.43■■■□□ 2.62
CSNK1E-204ENST00000403904 CELSR3Q9NYQ7 3312 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 FRYQ5TBA9 3013 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 FAM227AF5H4B4 570 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 ALDOCP09972 364 aaKnown RBP31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 RNH1P13489 461 aaKnown RBP31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 SDC1P18827 310 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 MAPK1P28482 360 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 ARFIP2P53365 341 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 DIO3P55073 304 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 TAS2R50P59544 299 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 VWA2Q5GFL6 755 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 FAM198BQ6UWH4 519 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 DTX1Q86Y01 620 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 LIX1Q8N485 282 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 CDC26Q8NHZ8 85 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 C16orf78Q8WTQ4 265 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 TM4SF18Q96CE8 201 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 RILPQ96NA2 401 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 CSF3RQ99062 836 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 CCDC28BQ9BUN5 200 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 TEX10Q9NXF1 929 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 NOP53Q9NZM5 478 aaKnown RBP31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 ANGPTL2Q9UKU9 493 aa31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 EIF3LQ9Y262 564 aaKnown RBP31.42■■■□□ 2.62
CSNK1E-204ENST00000403904 NCOR2Q9Y618 2525 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 E9PBE3 544 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 KLHL41O60662 606 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 RAB38P57729 211 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 ZNF763Q0D2J5 394 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 ERV3-1Q14264 604 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 CACNA2D3Q8IZS8 1091 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 FAM47BQ8NA70 645 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 NKD1Q969G9 470 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 EGLN2Q96KS0 407 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 MKKSQ9NPJ1 570 aaPredicted RBP31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 GPN3Q9UHW5 284 aaPredicted RBP31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 PHF11Q9UIL8 331 aa31.41■■■□□ 2.62
CSNK1E-204ENST00000403904 A0A1W2PR48 441 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 C9J4A7 227 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 PROM1O43490 865 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 JRKO75564 520 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 TCN2P20062 427 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 CPN2P22792 545 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 FOXL2P58012 376 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 TGIF1Q15583 401 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 C18orf63Q68DL7 685 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 MRPL14Q6P1L8 145 aaKnown RBP31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 CLHC1Q8NHS4 586 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 CT55Q8WUE5 264 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 TSSK3Q96PN8 268 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 G3BP2Q9UN86 482 aaKnown RBP31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 SPACA6W5XKT8 324 aa31.4■■■□□ 2.62
CSNK1E-204ENST00000403904 MED19A0JLT2 244 aaPredicted RBP31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 PSMD12O00232 456 aaPredicted RBP31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 CNOT3O75175 753 aaKnown RBP31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 PRKRAO75569 313 aaKnown RBP31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 G6PDP11413 515 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 ACPPP15309 386 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 STAT5AP42229 794 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 TRA2BP62995 288 aaKnown RBP31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 OCA2Q04671 838 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 SPATA21Q7Z572 469 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 SPATA19Q7Z5L4 167 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 STT3BQ8TCJ2 826 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 FKBP10Q96AY3 582 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 TBC1D20Q96BZ9 403 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 MARK4Q96L34 752 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 MS4A12Q9NXJ0 267 aa31.39■■■□□ 2.62
CSNK1E-204ENST00000403904 IGLV3-12A0A075B6K2 115 aa31.39■■■□□ 2.61
CSNK1E-204ENST00000403904 CYR61O00622 381 aa31.39■■■□□ 2.61
CSNK1E-204ENST00000403904 CDC123O75794 336 aaPredicted RBP31.39■■■□□ 2.61
CSNK1E-204ENST00000403904 BMP10O95393 424 aa31.39■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms