RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 IGFN1Q86VF2 1251 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 RNF175Q8N4F7 328 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 TMCO5AQ8N6Q1 288 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PLA2G15Q8NCC3 412 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 BTN2A2Q8WVV5 523 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 IPCEF1Q8WWN9 437 aaPredicted RBP15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 S100ZQ8WXG8 99 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 FOXJ1Q92949 421 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 VMP1Q96GC9 406 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PITX2Q99697 317 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ORAI3Q9BRQ5 295 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DUSP26Q9BV47 211 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ZSCAN32Q9NX65 697 aa15.24■□□□□ 0.03
CHRFAM7A-203ENST00000401522 A0A1W2PPC4 97 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SGTAO43765 313 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 C9P02748 559 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GPR1P46091 355 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 RXRGP48443 463 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CSNK2BP67870 215 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DOC2AQ14183 400 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 LAPTM4AQ15012 233 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ANXA8L1Q5VT79 327 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 RAET1GQ6H3X3 334 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 NIPAL1Q6NVV3 410 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CAMKMTQ7Z624 323 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ATG16L2Q8NAA4 619 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 TMEM145Q8NBT3 493 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ZBTB44Q8NCP5 570 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 VPS37AQ8NEZ2 397 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 C11orf24Q96F05 449 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 EPYCQ99645 322 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 TPT1P8Q9HAU6 139 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 THUMPD1Q9NXG2 353 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SH3GLB1Q9Y371 365 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 HS3ST3A1Q9Y663 406 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ARHGEF33A8MVX0 844 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PRAMEF26H0Y7S4 382 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 HRO43593 1189 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GALR2O43603 387 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 LAMP1P11279 417 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 HPCAL1P37235 193 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MAPK9P45984 424 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SERPINB10P48595 397 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CD97P48960 835 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ST13P50502 369 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 LRRC74AQ0VAA2 488 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ITGADQ13349 1161 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ATP1A4Q13733 1029 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 LDLRAP1Q5SW96 308 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CPTPQ5TA50 214 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SLCO6A1Q86UG4 719 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 P2RY8Q86VZ1 359 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 RBM12BQ8IXT5 1001 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GLYATL1Q969I3 302 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SH3KBP1Q96B97 665 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MTERF1Q99551 399 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DPH2Q9BQC3 489 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 TEX101Q9BY14 249 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CHST8Q9H2A9 424 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ADPRHL2Q9NX46 363 aa15.23■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 FUOMA2VDF0 154 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 KRT87PA6NCN2 255 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 E7EQ34 232 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 E9PQ18 207 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 M0R3G1 203 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 KPNA4O00629 521 aaPredicted RBP15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 FAM20BO75063 409 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MTX2O75431 263 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DIRAS1O95057 198 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 C1QCP02747 245 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MT-ND2P03891 347 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PCCBP05166 539 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 ABCB1P08183 1280 aaPredicted RBP15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 NR4A1P22736 598 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CD27P26842 260 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 AKT2P31751 481 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PCGF2P35227 344 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GRK3P35626 688 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 IGFALSP35858 605 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 MAP2K4P45985 399 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DGUOKQ16854 277 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PROX2Q3B8N5 592 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SYTL3Q4VX76 610 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 AGTRAPQ6RW13 159 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 PRSS48Q7RTY5 328 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GALNT10Q86SR1 603 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 TMEFF1Q8IYR6 380 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 DEFB119Q8N690 84 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CDC26Q8NHZ8 85 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 GLMNQ92990 594 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 FZD3Q9NPG1 666 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 AKIP1Q9NQ31 210 aa15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 STOX2Q9P2F5 926 aaPredicted RBP15.22■□□□□ 0.03
CHRFAM7A-203ENST00000401522 SUV39H1O43463 412 aa15.21■□□□□ 0.03
CHRFAM7A-203ENST00000401522 CATP04040 527 aaKnown RBP15.21■□□□□ 0.03
CHRFAM7A-203ENST00000401522 FUCA1P04066 466 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms