RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 FAM25EA8MYX2 175 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ANKRD65E5RJM6 399 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ALOX12P18054 663 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC6A8P48029 635 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DGKQP52824 942 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CLDN2P57739 230 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DCDP81605 110 aaKnown RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 TGFBR3Q03167 851 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 IL18R1Q13478 541 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SGCAQ16586 387 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 PAQR7Q86WK9 346 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 LNX2Q8N448 690 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 KLHL36Q8N4N3 616 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OR4F6Q8NGB9 312 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 LIPT1Q9Y234 373 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 BLOC1S5-TXNDC5H3BN57 136 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 KRT36O76013 467 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 GPIP06744 558 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 GSTT2BP0CG30 244 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 HK1P19367 917 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CARD17Q5XLA6 110 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 TTC27Q6P3X3 843 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SYCE2Q6PIF2 218 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 TDRPQ86YL5 185 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 NPAS3Q8IXF0 933 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OR10A6Q8NH74 314 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 UFD1Q92890 307 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 MUCL1Q96DR8 90 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DYNLRB1Q9NP97 96 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC17A7Q9P2U7 560 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 TESMINQ9Y4I5 508 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 A0A1W2PPM1 405 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SSNA1O43805 119 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 H1F0P07305 194 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 ITGA5P08648 1049 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 HTR3AP46098 478 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CCL11P51671 97 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 C3orf38Q5JPI3 329 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZER1Q7Z7L7 766 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF283Q8N7M2 679 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CHST14Q8NCH0 376 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 RLN3Q8WXF3 142 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 SCRN2Q96FV2 425 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PWWP2AQ96N64 755 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PBX4Q9BYU1 374 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 LAMP5Q9UJQ1 280 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 AP4B1Q9Y6B7 739 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 TRBV11-1A0A0K0K1C0 115 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CPSF4LA6NMK7 179 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 EIF1AYO14602 144 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 BEST1O76090 585 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 METTL18O95568 372 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 EIF1AXP47813 144 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 PTPRCAPQ14761 206 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 NRF1Q16656 503 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 OLFML2AQ68BL7 652 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ALYREFQ86V81 257 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF227Q86WZ6 799 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ARL10Q8N8L6 244 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 NFKBIDQ8NI38 313 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 FANK1Q8TC84 345 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 DTD2Q96FN9 168 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZIC5Q96T25 663 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 POLDIP3Q9BY77 421 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 ARRDC1-AS1Q9H2J1 176 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 KLHL21Q9UJP4 597 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 RAB21Q9UL25 225 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 TMEM184BQ9Y519 407 aaPredicted RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 ZFAND5O76080 213 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ALDH3A2P51648 485 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 GDF10P55107 478 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SIM1P81133 766 aaPredicted RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 PITPNAQ00169 270 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF761Q86XN6 746 aaPredicted RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 PGAM4Q8N0Y7 254 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF676Q8N7Q3 588 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 TRAPPC9Q96Q05 1148 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 BHLHE41Q9C0J9 482 aaPredicted RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 TAS2R7Q9NYW3 318 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ANKRD28O15084 1053 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CHP2O43745 196 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 MERTKQ12866 999 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 KCNJ11Q14654 390 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 GALNT5Q7Z7M9 940 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 UEVLDQ8IX04 471 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZZZ3Q8IYH5 903 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 OSTF1Q92882 214 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 HS6ST2Q96MM7 605 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 FEZF1A0PJY2 475 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 GGT3PA6NGU5 568 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 HAT1O14929 419 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PGAM2P15259 253 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CSNK1EP49674 416 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 CLCN2P51788 898 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SMSP52788 366 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SHC2P98077 582 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 IRF9Q00978 393 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms