RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 KLHL41O60662 606 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 GLRA3O75311 464 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SORBS2O94875 1100 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ICAM2P13598 275 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PTX3P26022 381 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CLCQ05315 142 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IGFBP7Q16270 282 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PLAG1Q6DJT9 500 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR4C11Q6IEV9 310 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IGFL2Q6UWQ7 119 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RIPOR1Q6ZS17 1223 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HPS6Q86YV9 775 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CNPY4Q8N129 248 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZADH2Q8N4Q0 377 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PPP4R1Q8TF05 950 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RGMAQ96B86 450 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LPAR4Q99677 370 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FARSBQ9NSD9 589 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 A8MUI8 341 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HAX1O00165 279 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR4F21O95013 312 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SCELO95171 688 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OTCP00480 354 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 F10P00742 488 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PROCP04070 461 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IMPDH1P20839 514 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CRHR1P34998 444 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CCT5P48643 541 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRKAA2P54646 552 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PHEXP78562 749 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SLC13A2Q13183 592 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRR30Q53SZ7 412 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CRB2Q5IJ48 1285 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FCRLBQ6BAA4 426 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SCUBE1Q8IWY4 988 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TM9SF4Q92544 642 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PNPLA2Q96AD5 504 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF717Q9BY31 904 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SLAMF7Q9NQ25 335 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PLA2G3Q9NZ20 509 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 B3GNT3Q9Y2A9 372 aa13.21□□□□□ -0.29
HLA-DQB1-202ENST00000399079 BAHCC1Q9P281 2608 aa13.21□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FOXE1O00358 373 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CLDN4O14493 209 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 COPEO14579 308 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PLIN3O60664 434 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 LDB3O75112 727 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 EEDO75530 441 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 GBAP04062 536 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 UQCRHP07919 91 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 BSGP35613 385 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SOX11P35716 441 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ST13P50502 369 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 HSD17B7P56937 341 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLAMF1Q13291 335 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MFAP5Q13361 173 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 GGTA1PQ4G0N0 100 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 Q6ZS92 163 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLC22A9Q8IVM8 553 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF595Q8IYB9 648 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CATSPER1Q8NEC5 780 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 DNAJB14Q8TBM8 379 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CNDP1Q96KN2 507 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 HBEGFQ99075 208 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 LYRM4Q9HD34 91 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 RAB21Q9UL25 225 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MRPS33Q9Y291 106 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PRKRAO75569 313 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PDYNP01213 254 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MYL2P10916 166 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLC26A5P58743 744 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 IFT88Q13099 833 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CUL3Q13618 768 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 EXT1Q16394 746 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TCHHL1Q5QJ38 904 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZYG11AQ6WRX3 759 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CUZD1Q86UP6 607 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KIF2BQ8N4N8 673 aa13.19□□□□□ -0.3
HLA-DQB1-202ENST00000399079 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms